The 2.0 version of rSNPBase

Variant report

Variant rs7517372
Chromosome Location chr1:63189564-63189565
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63178800-63190000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr1:63187000-63189800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:63187000-63189800 Weak transcription Brain Cingulate Gyrus brain
4 chr1:63187000-63190200 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr1:63187000-63191000 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr1:63187200-63189800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:63187200-63189800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr1:63187200-63189800 Weak transcription Brain Anterior Caudate brain
9 chr1:63187200-63189800 Weak transcription NH-A brain
10 chr1:63187200-63189800 Weak transcription Osteobl bone
11 chr1:63187200-63190200 Enhancers Primary monocytes fromperipheralblood blood
12 chr1:63187200-63190800 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr1:63187200-63191000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:63187200-63191800 Weak transcription K562 blood
15 chr1:63187200-63195200 Weak transcription Fetal Stomach stomach
16 chr1:63187400-63189800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:63187400-63189800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:63187400-63189800 Weak transcription Adipose Nuclei Adipose
19 chr1:63187400-63190000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:63187400-63190000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:63187400-63190200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr1:63187400-63190200 Weak transcription Stomach Mucosa stomach
23 chr1:63187400-63190400 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr1:63187400-63190600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr1:63187400-63190800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:63187400-63191000 Weak transcription Fetal Intestine Small intestine
27 chr1:63187400-63191200 Weak transcription Duodenum Mucosa Duodenum
28 chr1:63187400-63198000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:63187600-63189800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:63187600-63190000 Weak transcription Colonic Mucosa Colon
31 chr1:63188000-63190600 Weak transcription Small Intestine intestine
32 chr1:63188200-63190600 Weak transcription Fetal Heart heart
33 chr1:63188200-63191000 Enhancers GM12878-XiMat blood
34 chr1:63188200-63191600 Weak transcription Fetal Intestine Large intestine
35 chr1:63188400-63189800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr1:63188600-63194200 Enhancers Cortex derived primary cultured neurospheres brain
37 chr1:63188800-63189800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr1:63188800-63189800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr1:63189000-63191000 Weak transcription HepG2 liver
40 chr1:63189200-63190600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:63189200-63190800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:63189200-63190800 Enhancers Left Ventricle heart
43 chr1:63189200-63191000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:63189400-63190400 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015