Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1055080	0.93[CHB][hapmap];0.83[JPT][hapmap];0.85[ASN][1000 genomes]
rs1203905	0.93[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs1203907	0.93[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs1203910	0.88[ASN][1000 genomes]
rs1203915	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1203918	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1209523	1.00[CHB][hapmap];0.83[JPT][hapmap];0.89[ASN][1000 genomes]
rs1337919	0.83[JPT][hapmap]
rs1337920	0.91[ASN][1000 genomes]
rs1337921	0.91[ASN][1000 genomes]
rs16984154	0.97[EUR][1000 genomes]
rs2003076	0.98[EUR][1000 genomes]
rs6036157	0.98[EUR][1000 genomes]
rs6036158	0.98[EUR][1000 genomes]
rs6048205	0.81[JPT][hapmap]
rs6048206	0.83[JPT][hapmap]
rs6048209	0.83[JPT][hapmap]
rs6048216	0.98[EUR][1000 genomes]
rs7266093	0.98[EUR][1000 genomes]
rs910958	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs910959	0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428690	chr20:22528757-22649625	Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22579000-22583600	Enhancers	Stomach Mucosa	stomach

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