Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10429947	0.93[CHB][hapmap]
rs10465699	1.00[CEU][hapmap]
rs10494990	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs10779632	0.93[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap]
rs11120491	1.00[CEU][hapmap]
rs12023861	0.92[CHB][hapmap];1.00[MEX][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12024284	0.92[ASN][1000 genomes]
rs12025006	0.92[CHB][hapmap];0.95[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12031084	1.00[EUR][1000 genomes]
rs12044793	1.00[ASN][1000 genomes]
rs12064019	1.00[CEU][hapmap]
rs12131195	1.00[CEU][hapmap]
rs1349672	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1452633	0.81[CHB][hapmap];0.80[CHD][hapmap]
rs1452634	1.00[CEU][hapmap];0.93[CHB][hapmap];0.90[CHD][hapmap];0.81[GIH][hapmap];0.84[JPT][hapmap];1.00[EUR][1000 genomes]
rs17024077	1.00[EUR][1000 genomes]
rs17024306	1.00[CEU][hapmap]
rs2841623	1.00[EUR][1000 genomes]
rs57400751	1.00[EUR][1000 genomes]
rs575747	1.00[EUR][1000 genomes]
rs6656675	1.00[CEU][hapmap]
rs6657460	1.00[EUR][1000 genomes]
rs6688556	1.00[EUR][1000 genomes]
rs6695704	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs74140901	1.00[EUR][1000 genomes]
rs7538655	0.86[CHB][hapmap];0.90[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv468105	chr1:215167236-215248417	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv549182	chr1:215167236-215248417	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215206800-215213800	Weak transcription	Osteobl	bone
2	chr1:215206800-215216000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr1:215207200-215213600	Weak transcription	NHDF-Ad	bronchial

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