Variant report

Variant rs12068842
Chromosome Location chr1:56657070-56657071
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56653000-56657400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr1:56653000-56658200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:56653600-56658000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr1:56653800-56658000 Enhancers Fetal Muscle Leg muscle
5 chr1:56653800-56658200 Enhancers NHDF-Ad bronchial
6 chr1:56653800-56658400 Enhancers Psoas Muscle Psoas
7 chr1:56653800-56669400 Enhancers Placenta Placenta
8 chr1:56654000-56657200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:56654000-56657800 Enhancers Skeletal Muscle Female skeletal muscle
10 chr1:56654400-56657400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:56654400-56657600 Enhancers HUES64 Cell Line embryonic stem cell
12 chr1:56655000-56657600 Flanking Active TSS HepG2 liver
13 chr1:56655000-56658400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:56655200-56663800 Weak transcription Right Ventricle heart
15 chr1:56655600-56657400 Weak transcription Ovary ovary
16 chr1:56655800-56658200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:56656000-56657800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
18 chr1:56656000-56658000 Enhancers Osteobl bone
19 chr1:56656000-56662000 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr1:56656200-56657400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:56656200-56657400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr1:56656200-56657600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:56656200-56662200 Weak transcription H9 Cell Line embryonic stem cell
24 chr1:56656200-56662200 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:56656200-56663000 Weak transcription Right Atrium heart
26 chr1:56656200-56663400 Weak transcription Left Ventricle heart
27 chr1:56656600-56657200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:56656600-56658800 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:56656800-56657200 Flanking Active TSS A549 lung
30 chr1:56656800-56657800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:56656800-56662200 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:56657000-56657400 Enhancers Muscle Satellite Cultured Cells --
33 chr1:56657000-56657600 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr1:56657000-56657800 Enhancers Fetal Kidney kidney
35 chr1:56657000-56659400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:56657000-56661800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:56657000-56662200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr1:56657000-56662200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:56657000-56662200 Weak transcription Adipose Nuclei Adipose

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