Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10888966	1.00[EUR][1000 genomes]
rs11206755	1.00[AMR][1000 genomes]
rs11206763	1.00[AMR][1000 genomes]
rs11799457	0.91[AFR][1000 genomes]
rs11809768	0.96[AFR][1000 genomes]
rs12068842	1.00[AMR][1000 genomes]
rs12077310	1.00[AMR][1000 genomes]
rs12077704	1.00[AMR][1000 genomes]
rs12082866	1.00[AMR][1000 genomes]
rs12084027	1.00[AMR][1000 genomes]
rs12097616	1.00[AMR][1000 genomes]
rs12564902	0.96[AFR][1000 genomes]
rs17113650	1.00[EUR][1000 genomes]
rs17114018	1.00[EUR][1000 genomes]
rs56061713	0.89[AFR][1000 genomes]
rs56067074	0.89[AFR][1000 genomes]
rs59546270	1.00[AMR][1000 genomes]
rs60328132	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60902969	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61194392	1.00[AMR][1000 genomes]
rs6670641	1.00[EUR][1000 genomes]
rs72660490	0.93[AFR][1000 genomes]
rs72662232	0.85[AFR][1000 genomes]
rs72918349	1.00[AMR][1000 genomes]
rs72918380	1.00[AMR][1000 genomes]
rs72920407	1.00[AMR][1000 genomes]
rs74076306	1.00[EUR][1000 genomes]
rs74076324	1.00[EUR][1000 genomes]
rs7513784	1.00[AMR][1000 genomes]
rs7544069	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006422	chr1:56734772-56828606	Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv534972	chr1:56734772-56828606	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv932	chr1:56816732-56842261	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56791200-56820800	Weak transcription	Aorta	Aorta
2	chr1:56818400-56819000	Enhancers	Psoas Muscle	Psoas
3	chr1:56818600-56819000	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr1:56818600-56820600	Weak transcription	Left Ventricle	heart
5	chr1:56818800-56820800	Enhancers	Skeletal Muscle Female	skeletal muscle

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