Variant report

Variant	rs72662232
Chromosome Location	chr1:56850959-56850960
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs11799457	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11803744	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11809768	0.89[AFR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11811596	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12064855	0.81[ASN][1000 genomes]
rs12067784	0.81[ASN][1000 genomes]
rs12090289	0.86[ASN][1000 genomes]
rs12097108	0.86[ASN][1000 genomes]
rs12563026	0.86[ASN][1000 genomes]
rs12564902	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12567265	0.81[ASN][1000 genomes]
rs12569169	0.81[EUR][1000 genomes]
rs34846848	0.83[ASN][1000 genomes]
rs55791695	0.83[ASN][1000 genomes]
rs55896510	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56061713	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56067074	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56164989	0.83[ASN][1000 genomes]
rs56314028	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57024161	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs58527246	0.85[AFR][1000 genomes]
rs60307274	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs60328132	0.89[AFR][1000 genomes]
rs60902969	0.89[AFR][1000 genomes]
rs6666711	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6696992	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72660490	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660491	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660493	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660494	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660496	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660497	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660498	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660499	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72660502	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72662204	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72662205	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72662206	0.80[EUR][1000 genomes]
rs72662207	0.81[ASN][1000 genomes]
rs72662213	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72662214	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs72662217	0.81[ASN][1000 genomes]
rs72662227	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72662230	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72662235	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56840000-56862400	Weak transcription	Gastric	stomach
2	chr1:56842400-56862400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr1:56842600-56859800	Weak transcription	Right Ventricle	heart
4	chr1:56843000-56861800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr1:56844000-56855800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr1:56844200-56857800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr1:56844600-56853000	Weak transcription	Left Ventricle	heart
8	chr1:56845400-56856000	Weak transcription	HepG2	liver
9	chr1:56850000-56857000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr1:56850400-56851400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr1:56850600-56851000	Weak transcription	Fetal Heart	heart
12	chr1:56850600-56851400	Enhancers	NHDF-Ad	bronchial
13	chr1:56850800-56851400	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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