Variant report

Variant	rs56314028
Chromosome Location	chr1:56848687-56848688
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11803744	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11809768	0.80[EUR][1000 genomes]
rs11811596	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12564902	0.80[EUR][1000 genomes]
rs55791695	1.00[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs55896510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6666711	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6696992	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72662206	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72662213	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72662214	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72662227	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72662230	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72662232	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72662235	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56840000-56862400	Weak transcription	Gastric	stomach
2	chr1:56842400-56862400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr1:56842600-56849800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr1:56842600-56850600	Weak transcription	NHDF-Ad	bronchial
5	chr1:56842600-56859800	Weak transcription	Right Ventricle	heart
6	chr1:56842800-56848800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr1:56843000-56861800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr1:56844000-56855800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr1:56844200-56857800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr1:56844600-56853000	Weak transcription	Left Ventricle	heart
11	chr1:56845400-56856000	Weak transcription	HepG2	liver
12	chr1:56846800-56850400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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