The 2.0 version of rSNPBase

Variant report

Variant rs12084108
Chromosome Location chr1:175145019-175145020
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175126800-175148800 Strong transcription Primary monocytes fromperipheralblood blood
2 chr1:175127000-175148400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:175127200-175147800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:175127400-175149400 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:175129200-175159600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:175130200-175152600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:175135000-175152600 Weak transcription Aorta Aorta
8 chr1:175135000-175158400 Weak transcription Rectal Smooth Muscle rectum
9 chr1:175135800-175146000 Weak transcription Colonic Mucosa Colon
10 chr1:175135800-175146000 Weak transcription Fetal Intestine Large intestine
11 chr1:175136000-175145200 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:175136000-175145400 Weak transcription Ovary ovary
13 chr1:175136000-175151600 Weak transcription Fetal Stomach stomach
14 chr1:175136000-175157600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr1:175136200-175146800 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:175136600-175145200 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:175137400-175145400 Weak transcription Stomach Smooth Muscle stomach
18 chr1:175138000-175148000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr1:175138400-175145200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:175139200-175145400 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:175139400-175148400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr1:175140200-175145400 Weak transcription Thymus Thymus
23 chr1:175140200-175145600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:175140200-175146000 Weak transcription Right Ventricle heart
25 chr1:175140200-175146600 Strong transcription Primary neutrophils fromperipheralblood blood
26 chr1:175140200-175147800 Strong transcription Liver Liver
27 chr1:175140400-175145600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:175140600-175145400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:175140600-175146000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:175140600-175146000 Weak transcription Pancreas Pancrea
31 chr1:175140600-175147200 Weak transcription Gastric stomach
32 chr1:175140800-175145400 Weak transcription Fetal Intestine Small intestine
33 chr1:175140800-175146000 Weak transcription Lung lung
34 chr1:175140800-175148200 Weak transcription Esophagus oesophagus
35 chr1:175140800-175149200 Weak transcription Small Intestine intestine
36 chr1:175141000-175160200 Weak transcription HUVEC blood vessel
37 chr1:175141200-175145600 Weak transcription Fetal Heart heart
38 chr1:175141400-175158400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:175141600-175147800 Strong transcription Adipose Nuclei Adipose
40 chr1:175141600-175149200 Strong transcription Primary T cells from cord blood blood
41 chr1:175142400-175145400 Weak transcription Left Ventricle heart
42 chr1:175142800-175149000 Weak transcription Psoas Muscle Psoas
43 chr1:175143000-175145400 Weak transcription Fetal Muscle Leg muscle
44 chr1:175143000-175160800 Weak transcription Fetal Muscle Trunk muscle
45 chr1:175143600-175158000 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr1:175143800-175145400 Weak transcription Primary hematopoietic stem cells blood
47 chr1:175143800-175145400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr1:175143800-175145400 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:175143800-175146000 Weak transcription Spleen Spleen
50 chr1:175143800-175146800 Weak transcription Primary T killer memory cells from peripheral blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015