The 2.0 version of rSNPBase

Variant report

Variant rs3766681
Chromosome Location chr1:175160773-175160774
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175143000-175160800 Weak transcription Fetal Muscle Trunk muscle
2 chr1:175155800-175161000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:175157400-175160800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
4 chr1:175157400-175160800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
5 chr1:175157400-175161000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
6 chr1:175157600-175160800 Weak transcription Ovary ovary
7 chr1:175157600-175161600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
8 chr1:175157800-175160800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
9 chr1:175157800-175160800 Enhancers Small Intestine intestine
10 chr1:175157800-175161000 Flanking Active TSS Primary T cells from cord blood blood
11 chr1:175157800-175161600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
12 chr1:175158000-175160800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
13 chr1:175158000-175161000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
14 chr1:175158200-175161000 Enhancers Spleen Spleen
15 chr1:175158400-175161800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:175158400-175162800 Active TSS Rectal Smooth Muscle rectum
17 chr1:175158600-175160800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
18 chr1:175158600-175160800 Weak transcription Gastric stomach
19 chr1:175159200-175160800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:175159200-175162600 Active TSS Lung lung
21 chr1:175159400-175160800 Flanking Active TSS Primary T cells fromperipheralblood blood
22 chr1:175159400-175160800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
23 chr1:175159400-175161000 Flanking Active TSS Duodenum Mucosa Duodenum
24 chr1:175159400-175161200 Flanking Active TSS Adipose Nuclei Adipose
25 chr1:175159600-175160800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:175159600-175160800 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:175159600-175160800 Flanking Active TSS HMEC breast
28 chr1:175159600-175160800 Enhancers K562 blood
29 chr1:175159600-175161200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
30 chr1:175159600-175161800 Flanking Active TSS Primary hematopoietic stem cells blood
31 chr1:175159600-175161800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:175159800-175160800 Enhancers Placenta Amnion Placenta Amnion
33 chr1:175159800-175161000 Flanking Active TSS Primary B cells from cord blood blood
34 chr1:175159800-175162600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:175160000-175160800 Transcr. at gene 5' and 3' NHEK skin
36 chr1:175160000-175161000 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
37 chr1:175160000-175161000 Flanking Active TSS Liver Liver
38 chr1:175160000-175161000 Flanking Active TSS Thymus Thymus
39 chr1:175160000-175161200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
40 chr1:175160000-175161200 Flanking Active TSS Hela-S3 cervix
41 chr1:175160000-175161800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
42 chr1:175160200-175160800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:175160200-175160800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
44 chr1:175160200-175160800 Weak transcription Aorta Aorta
45 chr1:175160200-175160800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
46 chr1:175160200-175160800 Flanking Active TSS Right Ventricle heart
47 chr1:175160200-175161000 Flanking Active TSS Placenta Placenta
48 chr1:175160400-175160800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:175160400-175160800 Flanking Active TSS Primary B cells from peripheral blood blood
50 chr1:175160400-175160800 Flanking Active TSS Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015