The 2.0 version of rSNPBase

Variant report

Variant rs3766685
Chromosome Location chr1:175156428-175156429
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175129200-175159600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:175135000-175158400 Weak transcription Rectal Smooth Muscle rectum
3 chr1:175136000-175157600 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr1:175141000-175160200 Weak transcription HUVEC blood vessel
5 chr1:175141400-175158400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:175143000-175160800 Weak transcription Fetal Muscle Trunk muscle
7 chr1:175143600-175158000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:175146000-175157800 Genic enhancers Primary B cells from peripheral blood blood
9 chr1:175146200-175159400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:175146200-175159800 Weak transcription Stomach Smooth Muscle stomach
11 chr1:175146800-175160400 Weak transcription Fetal Intestine Large intestine
12 chr1:175147600-175160400 Weak transcription Colonic Mucosa Colon
13 chr1:175148200-175157400 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr1:175148200-175157600 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr1:175148200-175157800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr1:175148400-175159200 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:175148800-175158000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr1:175151400-175157400 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr1:175151400-175157400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
20 chr1:175152200-175159600 Enhancers Skeletal Muscle Male skeletal muscle
21 chr1:175152400-175157200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr1:175153600-175159600 Weak transcription H9 Cell Line embryonic stem cell
23 chr1:175153800-175157200 Weak transcription Fetal Thymus thymus
24 chr1:175153800-175157600 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr1:175153800-175158000 Weak transcription Esophagus oesophagus
26 chr1:175153800-175160400 Enhancers Primary monocytes fromperipheralblood blood
27 chr1:175154600-175158400 Genic enhancers Breast Myoepithelial Primary Cells Breast
28 chr1:175155200-175156800 Genic enhancers Primary T helper cells fromperipheralblood blood
29 chr1:175155200-175157200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:175155400-175156600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
31 chr1:175155400-175156600 Enhancers Duodenum Smooth Muscle Duodenum
32 chr1:175155600-175156600 Enhancers Primary hematopoietic stem cells blood
33 chr1:175155600-175156600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr1:175155600-175156600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:175155600-175156600 Enhancers Small Intestine intestine
36 chr1:175155600-175156600 Genic enhancers HMEC breast
37 chr1:175155600-175157200 Enhancers Psoas Muscle Psoas
38 chr1:175155600-175157200 Strong transcription Thymus Thymus
39 chr1:175155600-175157600 Enhancers Ovary ovary
40 chr1:175155600-175157800 Genic enhancers Primary T cells fromperipheralblood blood
41 chr1:175155600-175158000 Strong transcription Fetal Intestine Small intestine
42 chr1:175155600-175158000 Genic enhancers Sigmoid Colon Sigmoid Colon
43 chr1:175155600-175158000 Enhancers K562 blood
44 chr1:175155600-175158200 Genic enhancers Spleen Spleen
45 chr1:175155600-175159200 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:175155600-175159600 Genic enhancers Placenta Placenta
47 chr1:175155800-175156600 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
48 chr1:175155800-175156600 Genic enhancers Right Ventricle heart
49 chr1:175155800-175156600 Genic enhancers Skeletal Muscle Female skeletal muscle
50 chr1:175155800-175157400 Enhancers Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015