The 2.0 version of rSNPBase

Variant report

Variant rs3766692
Chromosome Location chr1:175145610-175145611
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175126800-175148800 Strong transcription Primary monocytes fromperipheralblood blood
2 chr1:175127000-175148400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:175127200-175147800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr1:175127400-175149400 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:175129200-175159600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:175130200-175152600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:175135000-175152600 Weak transcription Aorta Aorta
8 chr1:175135000-175158400 Weak transcription Rectal Smooth Muscle rectum
9 chr1:175135800-175146000 Weak transcription Colonic Mucosa Colon
10 chr1:175135800-175146000 Weak transcription Fetal Intestine Large intestine
11 chr1:175136000-175151600 Weak transcription Fetal Stomach stomach
12 chr1:175136000-175157600 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr1:175136200-175146800 Weak transcription Placenta Amnion Placenta Amnion
14 chr1:175138000-175148000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:175139400-175148400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr1:175140200-175146000 Weak transcription Right Ventricle heart
17 chr1:175140200-175146600 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr1:175140200-175147800 Strong transcription Liver Liver
19 chr1:175140600-175146000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:175140600-175146000 Weak transcription Pancreas Pancrea
21 chr1:175140600-175147200 Weak transcription Gastric stomach
22 chr1:175140800-175146000 Weak transcription Lung lung
23 chr1:175140800-175148200 Weak transcription Esophagus oesophagus
24 chr1:175140800-175149200 Weak transcription Small Intestine intestine
25 chr1:175141000-175160200 Weak transcription HUVEC blood vessel
26 chr1:175141400-175158400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr1:175141600-175147800 Strong transcription Adipose Nuclei Adipose
28 chr1:175141600-175149200 Strong transcription Primary T cells from cord blood blood
29 chr1:175142800-175149000 Weak transcription Psoas Muscle Psoas
30 chr1:175143000-175160800 Weak transcription Fetal Muscle Trunk muscle
31 chr1:175143600-175158000 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr1:175143800-175146000 Weak transcription Spleen Spleen
33 chr1:175143800-175146800 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr1:175144000-175151000 Weak transcription K562 blood
35 chr1:175144200-175147800 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:175144200-175148600 Strong transcription Primary B cells from cord blood blood
37 chr1:175144400-175146000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:175144400-175148800 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:175144800-175145800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr1:175144800-175146000 Strong transcription Primary B cells from peripheral blood blood
41 chr1:175144800-175146800 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:175144800-175147200 Strong transcription Primary T cells fromperipheralblood blood
43 chr1:175144800-175147800 Strong transcription Primary T helper cells PMA-I stimulated --
44 chr1:175145000-175145800 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr1:175145000-175146400 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr1:175145000-175147000 Strong transcription Fetal Thymus thymus
47 chr1:175145000-175147400 Strong transcription NHEK skin
48 chr1:175145000-175148400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:175145200-175145800 ZNF genes & repeats GM12878-XiMat blood
50 chr1:175145200-175146600 Strong transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015