The 2.0 version of rSNPBase

Variant report

Variant rs6674635
Chromosome Location chr1:175159778-175159779
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:175141000-175160200 Weak transcription HUVEC blood vessel
2 chr1:175143000-175160800 Weak transcription Fetal Muscle Trunk muscle
3 chr1:175146200-175159800 Weak transcription Stomach Smooth Muscle stomach
4 chr1:175146800-175160400 Weak transcription Fetal Intestine Large intestine
5 chr1:175147600-175160400 Weak transcription Colonic Mucosa Colon
6 chr1:175153800-175160400 Enhancers Primary monocytes fromperipheralblood blood
7 chr1:175155800-175160000 Enhancers Pancreas Pancrea
8 chr1:175155800-175161000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:175156800-175159800 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
10 chr1:175157000-175160000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:175157400-175159800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr1:175157400-175160000 Enhancers Thymus Thymus
13 chr1:175157400-175160600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
14 chr1:175157400-175160800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
15 chr1:175157400-175160800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
16 chr1:175157400-175161000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
17 chr1:175157600-175160400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:175157600-175160600 Weak transcription Fetal Stomach stomach
19 chr1:175157600-175160800 Weak transcription Ovary ovary
20 chr1:175157600-175161600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
21 chr1:175157800-175160400 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
22 chr1:175157800-175160800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
23 chr1:175157800-175160800 Enhancers Small Intestine intestine
24 chr1:175157800-175161000 Flanking Active TSS Primary T cells from cord blood blood
25 chr1:175157800-175161600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
26 chr1:175158000-175159800 Enhancers Pancreatic Islets Pancreatic Islet
27 chr1:175158000-175160400 Enhancers Fetal Thymus thymus
28 chr1:175158000-175160600 Enhancers Sigmoid Colon Sigmoid Colon
29 chr1:175158000-175160800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
30 chr1:175158000-175161000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
31 chr1:175158200-175160000 Weak transcription Fetal Intestine Small intestine
32 chr1:175158200-175161000 Enhancers Spleen Spleen
33 chr1:175158400-175160400 Active TSS Duodenum Smooth Muscle Duodenum
34 chr1:175158400-175161800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:175158400-175162800 Active TSS Rectal Smooth Muscle rectum
36 chr1:175158600-175160000 Weak transcription Esophagus oesophagus
37 chr1:175158600-175160200 Active TSS Rectal Mucosa Donor 29 rectum
38 chr1:175158600-175160800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
39 chr1:175158600-175160800 Weak transcription Gastric stomach
40 chr1:175158800-175160000 Enhancers Fetal Muscle Leg muscle
41 chr1:175158800-175160000 Weak transcription Stomach Mucosa stomach
42 chr1:175158800-175160200 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr1:175159000-175160000 Flanking Active TSS NHEK skin
44 chr1:175159000-175160200 Enhancers Aorta Aorta
45 chr1:175159200-175160200 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr1:175159200-175160800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:175159200-175162600 Active TSS Lung lung
48 chr1:175159400-175159800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:175159400-175159800 Weak transcription Placenta Amnion Placenta Amnion
50 chr1:175159400-175160200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015