The 2.0 version of rSNPBase

Variant report

Variant rs12105680
Chromosome Location chr2:191278986-191278987
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274000-191280600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr2:191274200-191282000 Weak transcription Right Ventricle heart
4 chr2:191274200-191291600 Weak transcription Fetal Stomach stomach
5 chr2:191274400-191285000 Weak transcription Colon Smooth Muscle Colon
6 chr2:191274600-191279000 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr2:191274600-191279400 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr2:191274600-191279400 Enhancers Primary T helper cells fromperipheralblood blood
9 chr2:191274600-191280000 Weak transcription Primary B cells from cord blood blood
10 chr2:191274600-191280400 Enhancers Primary T helper cells PMA-I stimulated --
11 chr2:191274600-191282400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr2:191274600-191291400 Weak transcription Fetal Intestine Large intestine
13 chr2:191274800-191279400 Enhancers Rectal Mucosa Donor 31 rectum
14 chr2:191274800-191280600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:191274800-191283800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr2:191274800-191285000 Weak transcription Rectal Smooth Muscle rectum
17 chr2:191274800-191286000 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
19 chr2:191275000-191279400 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr2:191275000-191282000 Weak transcription Right Atrium heart
21 chr2:191275200-191280800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr2:191275200-191282000 Weak transcription Fetal Brain Male brain
23 chr2:191276000-191279000 Enhancers Duodenum Mucosa Duodenum
24 chr2:191276000-191279200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr2:191276000-191280000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr2:191276400-191279200 Enhancers Brain Hippocampus Middle brain
27 chr2:191277200-191279000 Enhancers Gastric stomach
28 chr2:191277200-191279000 Enhancers Small Intestine intestine
29 chr2:191277400-191279000 Enhancers Primary T cells fromperipheralblood blood
30 chr2:191277400-191279000 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr2:191277400-191279000 Enhancers Sigmoid Colon Sigmoid Colon
32 chr2:191277400-191280600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:191277400-191291400 Weak transcription Fetal Intestine Small intestine
34 chr2:191277600-191280400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:191277800-191279000 Enhancers Esophagus oesophagus
36 chr2:191278200-191279000 Enhancers Adipose Nuclei Adipose
37 chr2:191278200-191279000 Enhancers Lung lung
38 chr2:191278200-191279200 Enhancers Rectal Mucosa Donor 29 rectum
39 chr2:191278200-191279400 Enhancers Primary T regulatory cells fromperipheralblood blood
40 chr2:191278400-191280600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr2:191278400-191291200 Weak transcription Fetal Brain Female brain
42 chr2:191278400-191291600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:191278600-191279000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
44 chr2:191278600-191279000 Enhancers Brain Angular Gyrus brain
45 chr2:191278600-191279400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr2:191278600-191279400 Enhancers Brain Inferior Temporal Lobe brain
47 chr2:191278600-191283200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr2:191278600-191283400 Weak transcription Stomach Mucosa stomach
49 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
50 chr2:191278800-191279200 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015