The 2.0 version of rSNPBase

Variant report

Variant rs11687958
Chromosome Location chr2:191282251-191282252
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274200-191291600 Weak transcription Fetal Stomach stomach
3 chr2:191274400-191285000 Weak transcription Colon Smooth Muscle Colon
4 chr2:191274600-191282400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr2:191274600-191291400 Weak transcription Fetal Intestine Large intestine
6 chr2:191274800-191283800 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr2:191274800-191285000 Weak transcription Rectal Smooth Muscle rectum
8 chr2:191274800-191286000 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
10 chr2:191277400-191291400 Weak transcription Fetal Intestine Small intestine
11 chr2:191278400-191291200 Weak transcription Fetal Brain Female brain
12 chr2:191278400-191291600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:191278600-191283200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:191278600-191283400 Weak transcription Stomach Mucosa stomach
15 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
16 chr2:191278800-191285200 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr2:191278800-191290000 Weak transcription K562 blood
18 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
19 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
21 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
22 chr2:191279200-191303000 Weak transcription NHEK skin
23 chr2:191279400-191283600 Weak transcription HMEC breast
24 chr2:191279400-191296400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr2:191279800-191284200 Enhancers Primary T helper cells fromperipheralblood blood
26 chr2:191279800-191285400 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr2:191279800-191285600 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr2:191280200-191283000 Enhancers Brain Anterior Caudate brain
29 chr2:191280200-191283200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
30 chr2:191280400-191283400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:191280400-191284600 Enhancers Brain Substantia Nigra brain
32 chr2:191280400-191291400 Weak transcription Thymus Thymus
33 chr2:191280400-191296400 Weak transcription Spleen Spleen
34 chr2:191280600-191282600 Enhancers Adipose Nuclei Adipose
35 chr2:191280800-191296400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr2:191281000-191283600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr2:191281000-191284200 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr2:191281200-191282600 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr2:191281200-191282600 Enhancers Fetal Muscle Leg muscle
40 chr2:191281200-191282800 Enhancers Primary T helper cells PMA-I stimulated --
41 chr2:191281200-191283000 Enhancers Primary T regulatory cells fromperipheralblood blood
42 chr2:191281200-191283000 Enhancers Brain Inferior Temporal Lobe brain
43 chr2:191281400-191282400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr2:191281400-191282800 Weak transcription Primary monocytes fromperipheralblood blood
45 chr2:191281400-191282800 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr2:191281400-191283200 Enhancers Primary T cells from cord blood blood
47 chr2:191281400-191283200 Enhancers Brain Cingulate Gyrus brain
48 chr2:191281400-191283400 Weak transcription Primary B cells from peripheral blood blood
49 chr2:191281400-191291600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr2:191281400-191292800 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015