The 2.0 version of rSNPBase

Variant report

Variant rs56278738
Chromosome Location chr2:191271709-191271710
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191268600-191271800 Weak transcription Primary hematopoietic stem cells blood
2 chr2:191268800-191272000 Weak transcription Brain Inferior Temporal Lobe brain
3 chr2:191269000-191272000 Weak transcription Brain Cingulate Gyrus brain
4 chr2:191269400-191272000 Weak transcription Brain Substantia Nigra brain
5 chr2:191269400-191272400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr2:191269600-191271800 Weak transcription Thymus Thymus
7 chr2:191269600-191272000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr2:191269600-191272200 Weak transcription A549 lung
9 chr2:191269800-191271800 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr2:191269800-191272000 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr2:191269800-191272000 Weak transcription Stomach Mucosa stomach
12 chr2:191269800-191272200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:191269800-191272200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:191269800-191272400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr2:191270000-191272000 Weak transcription Fetal Brain Female brain
16 chr2:191270000-191272000 Weak transcription HMEC breast
17 chr2:191270000-191272200 Weak transcription Fetal Intestine Large intestine
18 chr2:191270000-191272200 Weak transcription Placenta Placenta
19 chr2:191270000-191272200 Weak transcription NHEK skin
20 chr2:191270200-191272200 Weak transcription Fetal Intestine Small intestine
21 chr2:191270200-191272200 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr2:191270200-191272400 Weak transcription Hela-S3 cervix
23 chr2:191271000-191271800 Weak transcription Duodenum Mucosa Duodenum
24 chr2:191271400-191271800 Enhancers Dnd41 blood
25 chr2:191271400-191272000 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr2:191271400-191272000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:191271400-191272000 Enhancers Fetal Thymus thymus
28 chr2:191271400-191272200 Enhancers K562 blood
29 chr2:191271600-191271800 Bivalent Enhancer ES-I3 Cell Line embryonic stem cell
30 chr2:191271600-191271800 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr2:191271600-191271800 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
32 chr2:191271600-191272000 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
33 chr2:191271600-191272000 Enhancers Primary T cells fromperipheralblood blood
34 chr2:191271600-191272000 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr2:191271600-191272000 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr2:191271600-191272200 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr2:191271600-191272400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr2:191271600-191272600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015