The 2.0 version of rSNPBase

Variant report

Variant rs6744546
Chromosome Location chr2:191281168-191281169
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274200-191282000 Weak transcription Right Ventricle heart
3 chr2:191274200-191291600 Weak transcription Fetal Stomach stomach
4 chr2:191274400-191285000 Weak transcription Colon Smooth Muscle Colon
5 chr2:191274600-191282400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr2:191274600-191291400 Weak transcription Fetal Intestine Large intestine
7 chr2:191274800-191283800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr2:191274800-191285000 Weak transcription Rectal Smooth Muscle rectum
9 chr2:191274800-191286000 Enhancers Primary T killer naive cells fromperipheralblood blood
10 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
11 chr2:191275000-191282000 Weak transcription Right Atrium heart
12 chr2:191275200-191282000 Weak transcription Fetal Brain Male brain
13 chr2:191277400-191291400 Weak transcription Fetal Intestine Small intestine
14 chr2:191278400-191291200 Weak transcription Fetal Brain Female brain
15 chr2:191278400-191291600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:191278600-191283200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr2:191278600-191283400 Weak transcription Stomach Mucosa stomach
18 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
19 chr2:191278800-191281200 Weak transcription Left Ventricle heart
20 chr2:191278800-191282000 Weak transcription Ovary ovary
21 chr2:191278800-191285200 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr2:191278800-191290000 Weak transcription K562 blood
23 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
24 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr2:191279000-191281200 Weak transcription Small Intestine intestine
26 chr2:191279000-191282000 Weak transcription Gastric stomach
27 chr2:191279000-191282000 Weak transcription Lung lung
28 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
29 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
30 chr2:191279200-191281400 Weak transcription Brain Cingulate Gyrus brain
31 chr2:191279200-191303000 Weak transcription NHEK skin
32 chr2:191279400-191281200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr2:191279400-191283600 Weak transcription HMEC breast
34 chr2:191279400-191296400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr2:191279800-191281400 Enhancers Dnd41 blood
36 chr2:191279800-191281800 Enhancers Primary T helper naive cells from peripheral blood blood
37 chr2:191279800-191284200 Enhancers Primary T helper cells fromperipheralblood blood
38 chr2:191279800-191285400 Enhancers Primary T killer memory cells from peripheral blood blood
39 chr2:191279800-191285600 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr2:191280000-191281400 Enhancers Primary monocytes fromperipheralblood blood
41 chr2:191280000-191281400 Enhancers Primary T cells fromperipheralblood blood
42 chr2:191280000-191281400 Enhancers Sigmoid Colon Sigmoid Colon
43 chr2:191280000-191281600 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr2:191280000-191282200 Enhancers Primary T helper 17 cells PMA-I stimulated --
45 chr2:191280200-191281400 Enhancers Primary B cells from peripheral blood blood
46 chr2:191280200-191281400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr2:191280200-191283000 Enhancers Brain Anterior Caudate brain
48 chr2:191280200-191283200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr2:191280400-191281200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr2:191280400-191281400 Flanking Active TSS Primary T cells from cord blood blood

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Last update: Aug 31, 2015