The 2.0 version of rSNPBase

Variant report

Variant rs12125111
Chromosome Location chr1:84345606-84345607
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84326800-84348200 Weak transcription Cortex derived primary cultured neurospheres brain
2 chr1:84326800-84352600 Weak transcription Fetal Muscle Trunk muscle
3 chr1:84327000-84348400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr1:84327000-84352400 Weak transcription Aorta Aorta
5 chr1:84327000-84361800 Weak transcription Fetal Brain Female brain
6 chr1:84327000-84375400 Weak transcription Brain Germinal Matrix brain
7 chr1:84327200-84348600 Weak transcription Stomach Smooth Muscle stomach
8 chr1:84327200-84349600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr1:84327200-84351400 Weak transcription Brain Inferior Temporal Lobe brain
10 chr1:84328200-84354400 Weak transcription Brain Substantia Nigra brain
11 chr1:84329000-84352200 Weak transcription Brain Angular Gyrus brain
12 chr1:84329000-84373000 Weak transcription Brain Cingulate Gyrus brain
13 chr1:84331000-84352400 Weak transcription Fetal Muscle Leg muscle
14 chr1:84331400-84348000 Weak transcription HSMM muscle
15 chr1:84333400-84382400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr1:84334600-84355400 Weak transcription HSMMtube muscle
17 chr1:84335800-84352400 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:84336400-84349600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:84338600-84348200 Weak transcription Liver Liver
20 chr1:84338800-84367600 Weak transcription Pancreas Pancrea
21 chr1:84341000-84359400 Weak transcription Psoas Muscle Psoas
22 chr1:84341200-84380400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:84343600-84361800 Weak transcription Fetal Brain Male brain
24 chr1:84343800-84348400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:84344800-84345800 Strong transcription Brain Hippocampus Middle brain
26 chr1:84345600-84348200 Weak transcription Brain Anterior Caudate brain
27 chr1:84345600-84384400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015