Variant report

Variant	rs12254277
Chromosome Location	chr10:22663476-22663477
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10828304	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11012953	0.83[AMR][1000 genomes]
rs11012955	0.83[AMR][1000 genomes]
rs11012956	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11012960	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11012961	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11012965	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11012967	0.83[AMR][1000 genomes]
rs11012973	0.83[AMR][1000 genomes]
rs12245533	0.83[AMR][1000 genomes]
rs12257095	0.96[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12257451	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12258156	0.83[AMR][1000 genomes]
rs16922183	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2026632	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6482207	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7073585	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7083243	0.83[AMR][1000 genomes]
rs7084083	0.81[AFR][1000 genomes]
rs7088499	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7101082	0.81[AFR][1000 genomes]
rs729111	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7893841	0.83[AMR][1000 genomes]
rs7893987	0.82[AFR][1000 genomes]
rs7900105	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7904484	0.83[AMR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22659400-22663800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
2	chr10:22659600-22663600	Weak transcription	GM12878-XiMat	blood
3	chr10:22660000-22663600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr10:22660400-22663800	Weak transcription	Primary hematopoietic stem cells	blood
5	chr10:22661600-22663800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr10:22662200-22663800	Weak transcription	K562	blood
7	chr10:22663200-22664400	Enhancers	HUVEC	blood vessel

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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