Variant report
| Variant | rs11012973 |
|---|---|
| Chromosome Location | chr10:22667192-22667193 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:5)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:5 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:22661284..22664222-chr10:22666749..22669347,3 | K562 | blood: | |
| 2 | chr10:22666585..22669075-chr10:22673726..22675313,2 | K562 | blood: | |
| 3 | chr10:22657153..22660891-chr10:22664033..22667441,5 | K562 | blood: | |
| 4 | chr10:22665432..22667903-chr10:22673879..22675419,2 | K562 | blood: | |
| 5 | chr10:22659391..22664168-chr10:22664639..22669197,6 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:44)
| rs_ID | r2[population] |
|---|---|
| rs10828303 | 0.85[AMR][1000 genomes] |
| rs10828304 | 0.83[AMR][1000 genomes] |
| rs11012938 | 0.85[AMR][1000 genomes] |
| rs11012939 | 0.85[AMR][1000 genomes] |
| rs11012941 | 0.85[AMR][1000 genomes] |
| rs11012942 | 0.85[AMR][1000 genomes] |
| rs11012953 | 1.00[AMR][1000 genomes] |
| rs11012955 | 1.00[AMR][1000 genomes] |
| rs11012956 | 1.00[AMR][1000 genomes] |
| rs11012960 | 1.00[AMR][1000 genomes] |
| rs11012961 | 0.83[AMR][1000 genomes] |
| rs11012965 | 1.00[AMR][1000 genomes] |
| rs11012967 | 1.00[AMR][1000 genomes] |
| rs12240495 | 0.85[AMR][1000 genomes] |
| rs12240577 | 0.85[AMR][1000 genomes] |
| rs12245533 | 1.00[AMR][1000 genomes] |
| rs12254277 | 0.83[AMR][1000 genomes] |
| rs12255961 | 0.85[AMR][1000 genomes] |
| rs12257451 | 0.83[AMR][1000 genomes] |
| rs12258156 | 1.00[AMR][1000 genomes] |
| rs12263397 | 0.85[AMR][1000 genomes] |
| rs12263441 | 0.85[AMR][1000 genomes] |
| rs12263897 | 0.88[AFR][1000 genomes];0.85[AMR][1000 genomes] |
| rs16922163 | 0.85[AMR][1000 genomes] |
| rs16922183 | 0.83[AMR][1000 genomes] |
| rs2026632 | 1.00[AMR][1000 genomes] |
| rs6482207 | 1.00[AMR][1000 genomes] |
| rs7069551 | 0.85[AMR][1000 genomes] |
| rs7071244 | 0.85[AMR][1000 genomes] |
| rs7072756 | 0.85[AMR][1000 genomes] |
| rs7073046 | 0.85[AMR][1000 genomes] |
| rs7073585 | 1.00[AMR][1000 genomes] |
| rs7082672 | 0.85[AMR][1000 genomes] |
| rs7083243 | 1.00[AMR][1000 genomes] |
| rs7085030 | 0.85[AMR][1000 genomes] |
| rs7085161 | 0.85[AMR][1000 genomes] |
| rs7086440 | 0.85[AMR][1000 genomes] |
| rs7088499 | 0.83[AMR][1000 genomes] |
| rs729111 | 0.83[AMR][1000 genomes] |
| rs7893841 | 1.00[AMR][1000 genomes] |
| rs7900105 | 1.00[AMR][1000 genomes] |
| rs7904484 | 1.00[AMR][1000 genomes] |
| rs7913881 | 0.85[AMR][1000 genomes] |
| rs7916150 | 0.85[AMR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:22665600-22670200 | Weak transcription | K562 | blood |
| 2 | chr10:22666000-22667400 | Enhancers | GM12878-XiMat | blood |
