Variant report

Variant	rs12291710
Chromosome Location	chr11:76051495-76051496
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76050572..76052793-chr11:76153038..76155860,2	K562	blood:

Variant related genes	Relation type
ENSG00000255135	Chromatin interaction

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11236724	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[MKK][hapmap];0.83[YRI][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12270671	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12271264	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[MKK][hapmap];0.94[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12281889	0.91[MKK][hapmap];0.83[AFR][1000 genomes]
rs12573970	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12575838	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12576140	0.85[AMR][1000 genomes]
rs12576436	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12577750	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12577885	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17134820	1.00[CEU][hapmap]
rs2156714	0.85[AMR][1000 genomes]
rs3814712	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61685496	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7102664	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7112778	0.85[AMR][1000 genomes]
rs7112895	0.85[AMR][1000 genomes]
rs7118334	0.81[AMR][1000 genomes]
rs7125625	1.00[CEU][hapmap]
rs7127263	0.85[AMR][1000 genomes]

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76046600-76054600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:76048000-76060000	Weak transcription	Spleen	Spleen
3	chr11:76048000-76061400	Weak transcription	Primary B cells from peripheral blood	blood
4	chr11:76048000-76064800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr11:76048200-76064000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr11:76048400-76061800	Weak transcription	Duodenum Smooth Muscle	Duodenum
7	chr11:76048600-76059800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr11:76049000-76052200	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr11:76050000-76064600	Weak transcription	Rectal Smooth Muscle	rectum
10	chr11:76050200-76052200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr11:76050400-76060000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr11:76050400-76060000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr11:76050400-76060400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr11:76050400-76060400	Weak transcription	Stomach Smooth Muscle	stomach
15	chr11:76050400-76064000	Weak transcription	Fetal Stomach	stomach
16	chr11:76050400-76064200	Weak transcription	Left Ventricle	heart
17	chr11:76050400-76064200	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr11:76050400-76064200	Weak transcription	Thymus	Thymus
19	chr11:76050400-76064200	Weak transcription	NHLF	lung
20	chr11:76050400-76065000	Weak transcription	Colonic Mucosa	Colon
21	chr11:76050600-76054400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
22	chr11:76050600-76059600	Weak transcription	Primary B cells from cord blood	blood
23	chr11:76050600-76060000	Weak transcription	Placenta	Placenta
24	chr11:76050600-76064200	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr11:76050600-76064600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr11:76050800-76059000	Weak transcription	Liver	Liver
27	chr11:76050800-76059800	Weak transcription	Primary neutrophils fromperipheralblood	blood
28	chr11:76050800-76063800	Weak transcription	Primary T helper cells PMA-I stimulated	--
29	chr11:76050800-76063800	Weak transcription	Osteobl	bone
30	chr11:76050800-76064200	Weak transcription	Primary hematopoietic stem cells	blood
31	chr11:76051000-76052400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr11:76051000-76060000	Weak transcription	Fetal Thymus	thymus
33	chr11:76051000-76063800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr11:76051000-76064200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
35	chr11:76051000-76064400	Weak transcription	Aorta	Aorta
36	chr11:76051200-76052400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr11:76051200-76053000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
38	chr11:76051200-76056200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr11:76051200-76056800	Weak transcription	Lung	lung
40	chr11:76051200-76059800	Weak transcription	Primary T cells fromperipheralblood	blood
41	chr11:76051200-76059800	Weak transcription	Fetal Muscle Trunk	muscle
42	chr11:76051200-76061600	Weak transcription	Duodenum Mucosa	Duodenum
43	chr11:76051200-76065000	Weak transcription	Gastric	stomach
44	chr11:76051200-76065200	Weak transcription	Right Ventricle	heart
45	chr11:76051200-76066200	Weak transcription	NHDF-Ad	bronchial
46	chr11:76051400-76051600	Enhancers	HepG2	liver
47	chr11:76051400-76051800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
48	chr11:76051400-76056800	Weak transcription	Fetal Muscle Leg	muscle
49	chr11:76051400-76059400	Weak transcription	Primary monocytes fromperipheralblood	blood
50	chr11:76051400-76059400	Weak transcription	Adipose Nuclei	Adipose

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