Variant report

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10791952	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10791961	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10896227	0.85[AFR][1000 genomes]
rs10896290	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10896325	0.84[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs10896345	0.85[EUR][1000 genomes]
rs10896484	0.81[CHB][hapmap]
rs11227964	0.84[AFR][1000 genomes]
rs11228647	0.81[CHB][hapmap]
rs12225008	0.81[CHB][hapmap]
rs12272403	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12277883	0.85[EUR][1000 genomes]
rs12285921	0.85[EUR][1000 genomes]
rs1573512	0.85[EUR][1000 genomes]
rs1905055	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1945228	0.85[EUR][1000 genomes]
rs2128132	0.83[AFR][1000 genomes]
rs2220001	0.85[AFR][1000 genomes]
rs4420287	0.85[EUR][1000 genomes]
rs4938829	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs4939037	0.85[EUR][1000 genomes]
rs4939046	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs605734	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs611459	0.81[CHB][hapmap]
rs624412	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs652537	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs6591310	0.82[EUR][1000 genomes]
rs675991	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs7105808	0.84[EUR][1000 genomes]
rs7116573	0.85[EUR][1000 genomes]
rs7126732	0.85[AFR][1000 genomes]
rs7131637	0.85[EUR][1000 genomes]
rs7930678	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7931261	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7933772	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs7940239	0.85[AFR][1000 genomes]
rs871301	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050024	chr11:55900482-56518943	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	52 gene(s)	inside rSNPs	diseases
2	nsv497854	chr11:55917298-56537994	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
3	nsv832161	chr11:56046173-56166964	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	11 gene(s)	inside rSNPs	diseases
4	nsv555096	chr11:56084444-56235061	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	diseases
5	nsv555097	chr11:56084611-56235061	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	diseases
6	nsv971949	chr11:56126625-56344170	Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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