The 2.0 version of rSNPBase

Variant report

Variant rs12409225
Chromosome Location chr1:223677206-223677207
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223674400-223677800 Weak transcription HUVEC blood vessel
2 chr1:223674400-223678000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:223674400-223678400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr1:223674600-223677600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:223674600-223677800 Weak transcription NHDF-Ad bronchial
6 chr1:223674600-223678400 Weak transcription Esophagus oesophagus
7 chr1:223674800-223677600 Weak transcription Osteobl bone
8 chr1:223674800-223678000 Weak transcription Muscle Satellite Cultured Cells --
9 chr1:223675000-223677400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:223675000-223677600 Weak transcription NH-A brain
11 chr1:223675000-223677800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:223675800-223677400 Weak transcription HMEC breast
13 chr1:223675800-223678400 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:223676400-223679000 Enhancers Stomach Mucosa stomach
15 chr1:223676800-223678800 Enhancers Rectal Mucosa Donor 31 rectum
16 chr1:223676800-223678800 Enhancers NHEK skin
17 chr1:223677000-223677400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:223677000-223679000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015