Variant report

No.	Distal block	Cell Line	Cell type
1	chr3:17909020..17912909-chr3:17926359..17928346,3	K562	blood:
2	chr3:17909966..17912516-chr3:17914801..17916339,2	K562	blood:
3	chr3:17886187..17888501-chr3:17910971..17912809,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1019848	0.88[CHB][hapmap]
rs12489702	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12493277	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13059889	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs13067311	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs13089217	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13089390	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13092745	0.82[ASN][1000 genomes]
rs13096605	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs13100478	0.80[CEU][hapmap];1.00[JPT][hapmap]
rs34580836	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34620069	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs34841152	0.81[ASN][1000 genomes]
rs35458273	0.82[ASN][1000 genomes]
rs35513271	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35596310	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs35995641	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs36078449	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs4908945	0.82[ASN][1000 genomes]
rs4909008	0.85[ASN][1000 genomes]
rs66910329	0.88[ASN][1000 genomes]
rs67712814	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999594	chr3:17690416-17982318	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv966993	chr3:17911152-17913937	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17903400-17913600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr3:17904200-17936200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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