Variant report

No.	Distal block	Cell Line	Cell type
1	chr3:17909020..17912909-chr3:17926359..17928346,3	K562	blood:
2	chr3:17909966..17912516-chr3:17914801..17916339,2	K562	blood:
3	chr3:17886187..17888501-chr3:17910971..17912809,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12489702	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12489764	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12493277	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13059889	0.88[ASN][1000 genomes]
rs13067311	0.94[ASN][1000 genomes]
rs13088161	0.81[ASN][1000 genomes]
rs13089217	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13089390	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13092745	0.86[ASN][1000 genomes]
rs13096605	0.88[ASN][1000 genomes]
rs34432738	0.81[ASN][1000 genomes]
rs34580836	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34620069	0.91[ASN][1000 genomes]
rs34841152	1.00[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs34990473	0.81[ASN][1000 genomes]
rs35071338	0.81[ASN][1000 genomes]
rs35513271	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35596310	0.91[ASN][1000 genomes]
rs35995641	0.94[ASN][1000 genomes]
rs36078449	0.88[ASN][1000 genomes]
rs4908945	0.86[ASN][1000 genomes]
rs66910329	1.00[AFR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999594	chr3:17690416-17982318	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv966993	chr3:17911152-17913937	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17903400-17913600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr3:17904200-17936200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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