Variant report

Variant	rs34432738
Chromosome Location	chr3:17984897-17984898
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs13059889	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13062364	1.00[AFR][1000 genomes]
rs13067311	0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13088161	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13092745	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13096605	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs34467492	1.00[AFR][1000 genomes]
rs34580836	0.80[ASN][1000 genomes]
rs34620069	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34763677	1.00[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs34841152	0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34891393	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34990473	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35071338	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35458273	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35596310	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35995641	0.92[EUR][1000 genomes]
rs36078449	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4908945	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4908949	0.86[ASN][1000 genomes]
rs4908953	1.00[AFR][1000 genomes]
rs4909002	1.00[AFR][1000 genomes]
rs4909004	1.00[AFR][1000 genomes]
rs4909008	1.00[AMR][1000 genomes];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs66910329	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs67712814	0.81[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17980400-17987600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:17981400-17986200	Weak transcription	Fetal Heart	heart
3	chr3:17981800-17986000	Weak transcription	Dnd41	blood
4	chr3:17981800-17986600	Weak transcription	Primary hematopoietic stem cells	blood
5	chr3:17982200-17986400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
6	chr3:17982600-17986400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr3:17982600-17986400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr3:17983000-17986600	Weak transcription	Fetal Thymus	thymus
9	chr3:17983200-17986800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr3:17983400-17985000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr3:17983400-17986000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr3:17983400-17986800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr3:17983400-17987200	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr3:17984400-17985000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr3:17984400-17986800	Weak transcription	HMEC	breast
16	chr3:17984600-17986600	Weak transcription	Thymus	Thymus
17	chr3:17984800-17985000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr3:17984800-17985000	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr3:17984800-17986800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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