Variant report

No.	Distal block	Cell Line	Cell type
1	chr4:166288632..166293225-chr4:166298602..166301459,5	MCF-7	breast:
2	chr4:166287211..166290907-chr4:166291276..166292929,3	K562	blood:
3	chr4:166279563..166282339-chr4:166287037..166289622,2	MCF-7	breast:
4	chr4:166284247..166286679-chr4:166288539..166290783,2	K562	blood:

Variant related genes	Relation type
ENSG00000109472	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11944875	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12498302	0.86[AMR][1000 genomes]
rs12502374	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12503472	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12509669	0.82[CEU][hapmap]
rs12509710	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12513198	1.00[CEU][hapmap];0.88[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12642246	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13113058	0.84[AMR][1000 genomes]
rs13123297	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13148844	0.83[CEU][hapmap]
rs13151882	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1347744	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1370683	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1438112	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17624714	0.87[ASN][1000 genomes]
rs17686668	0.87[ASN][1000 genomes]
rs4621390	0.86[ASN][1000 genomes]
rs4690812	0.89[ASN][1000 genomes]
rs875486	0.95[EUR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166282600-166290800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr4:166285400-166290000	Enhancers	HepG2	liver
3	chr4:166286800-166299400	Weak transcription	HMEC	breast
4	chr4:166287200-166290200	Enhancers	Hela-S3	cervix
5	chr4:166287600-166296000	Weak transcription	Fetal Intestine Small	intestine
6	chr4:166288600-166291000	Weak transcription	Fetal Intestine Large	intestine
7	chr4:166289000-166290000	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr4:166289200-166289800	Enhancers	H1 Cell Line	embryonic stem cell
9	chr4:166289200-166289800	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr4:166289200-166290000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr4:166289200-166290000	Enhancers	H9 Cell Line	embryonic stem cell
12	chr4:166289200-166290000	Enhancers	HUES6 Cell Line	embryonic stem cell
13	chr4:166289200-166290000	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr4:166289200-166290000	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr4:166289400-166290000	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr4:166289400-166290000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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