The 2.0 version of rSNPBase

Variant report

Variant rs12534921
Chromosome Location chr7:26877210-26877211
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:26853400-26882600 Weak transcription Adipose Nuclei Adipose
2 chr7:26861000-26882600 Weak transcription HUVEC blood vessel
3 chr7:26862200-26877800 Weak transcription Primary T cells from cord blood blood
4 chr7:26863200-26893200 Weak transcription A549 lung
5 chr7:26863600-26894600 Weak transcription Fetal Intestine Large intestine
6 chr7:26867200-26897000 Weak transcription Lung lung
7 chr7:26869200-26889800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr7:26870000-26884200 Weak transcription Duodenum Mucosa Duodenum
9 chr7:26870000-26885000 Weak transcription GM12878-XiMat blood
10 chr7:26870400-26894400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr7:26870600-26896000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr7:26871000-26902200 Weak transcription Dnd41 blood
13 chr7:26871600-26896000 Weak transcription Rectal Smooth Muscle rectum
14 chr7:26872400-26880800 Weak transcription HMEC breast
15 chr7:26872400-26896200 Weak transcription Fetal Intestine Small intestine
16 chr7:26872600-26880400 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr7:26872600-26890000 Weak transcription NHEK skin
18 chr7:26872600-26894800 Weak transcription Primary hematopoietic stem cells blood
19 chr7:26872800-26892800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr7:26875200-26889600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr7:26875600-26896000 Weak transcription Stomach Smooth Muscle stomach
22 chr7:26875800-26878600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr7:26876000-26879200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr7:26876000-26884000 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr7:26876000-26896000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr7:26876200-26881600 Strong transcription Primary B cells from cord blood blood
27 chr7:26876200-26896200 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr7:26876600-26877400 Strong transcription Duodenum Smooth Muscle Duodenum
29 chr7:26876600-26889800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr7:26876800-26877600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr7:26876800-26878000 Strong transcription Primary B cells from peripheral blood blood
32 chr7:26876800-26878600 Weak transcription Fetal Lung lung
33 chr7:26877000-26877400 ZNF genes & repeats Primary monocytes fromperipheralblood blood
34 chr7:26877000-26877400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr7:26877200-26877400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr7:26877200-26878000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr7:26877200-26878000 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr7:26877200-26883800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr7:26877200-26894400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr7:26877200-26897000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr7:26877200-26897000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015