Variant report

Variant rs3801805
Chromosome Location chr7:26897640-26897641
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:26871000-26902200 Weak transcription Dnd41 blood
2 chr7:26886200-26903400 Weak transcription Spleen Spleen
3 chr7:26893600-26897800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr7:26895000-26898400 Active TSS Breast Myoepithelial Primary Cells Breast
5 chr7:26895200-26898200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr7:26895800-26897800 Active TSS Duodenum Smooth Muscle Duodenum
7 chr7:26895800-26898800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr7:26896000-26898600 Active TSS Stomach Smooth Muscle stomach
9 chr7:26896200-26898400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
10 chr7:26896400-26902600 Weak transcription NHDF-Ad bronchial
11 chr7:26896600-26898400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr7:26896600-26898400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr7:26896800-26897800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
14 chr7:26896800-26897800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
15 chr7:26896800-26898000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
16 chr7:26896800-26898000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
17 chr7:26896800-26898000 Active TSS NHEK skin
18 chr7:26897000-26897800 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
19 chr7:26897000-26897800 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
20 chr7:26897000-26897800 Flanking Bivalent TSS/Enh HUES48 Cell Line embryonic stem cell
21 chr7:26897000-26897800 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
22 chr7:26897000-26897800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr7:26897000-26897800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
24 chr7:26897000-26897800 Flanking Active TSS Primary B cells from peripheral blood blood
25 chr7:26897000-26897800 Bivalent Enhancer Primary T cells fromperipheralblood blood
26 chr7:26897000-26897800 Active TSS Rectal Smooth Muscle rectum
27 chr7:26897000-26897800 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
28 chr7:26897000-26897800 Active TSS HepG2 liver
29 chr7:26897000-26898000 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
30 chr7:26897000-26898000 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr7:26897000-26898000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
32 chr7:26897000-26898000 Flanking Active TSS HUVEC blood vessel
33 chr7:26897000-26898200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
34 chr7:26897000-26898200 Flanking Active TSS Adipose Nuclei Adipose
35 chr7:26897000-26898200 Bivalent/Poised TSS Fetal Kidney kidney
36 chr7:26897000-26898200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
37 chr7:26897000-26898200 Active TSS GM12878-XiMat blood
38 chr7:26897000-26898400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr7:26897000-26898400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr7:26897000-26898400 Enhancers K562 blood
41 chr7:26897000-26898800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr7:26897200-26897800 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr7:26897200-26897800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
44 chr7:26897200-26897800 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
45 chr7:26897200-26897800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
46 chr7:26897200-26897800 Bivalent/Poised TSS Brain Angular Gyrus brain
47 chr7:26897200-26897800 Bivalent Enhancer Brain Germinal Matrix brain
48 chr7:26897200-26897800 Bivalent Enhancer Placenta Placenta
49 chr7:26897200-26898000 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
50 chr7:26897200-26898000 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain

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