The 2.0 version of rSNPBase

Variant report

Variant rs6461980
Chromosome Location chr7:26894123-26894124
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:26863600-26894600 Weak transcription Fetal Intestine Large intestine
2 chr7:26867200-26897000 Weak transcription Lung lung
3 chr7:26870400-26894400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr7:26870600-26896000 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr7:26871000-26902200 Weak transcription Dnd41 blood
6 chr7:26871600-26896000 Weak transcription Rectal Smooth Muscle rectum
7 chr7:26872400-26896200 Weak transcription Fetal Intestine Small intestine
8 chr7:26872600-26894800 Weak transcription Primary hematopoietic stem cells blood
9 chr7:26875600-26896000 Weak transcription Stomach Smooth Muscle stomach
10 chr7:26876000-26896000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr7:26876200-26896200 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr7:26877200-26894400 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr7:26877200-26897000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr7:26877200-26897000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr7:26883200-26895800 Weak transcription Adipose Nuclei Adipose
16 chr7:26883800-26894800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr7:26883800-26896000 Weak transcription NHDF-Ad bronchial
18 chr7:26886200-26903400 Weak transcription Spleen Spleen
19 chr7:26890400-26894400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr7:26891000-26894200 Weak transcription Primary B cells from cord blood blood
21 chr7:26891200-26895000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr7:26892800-26895000 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr7:26892800-26895000 Enhancers NHEK skin
24 chr7:26892800-26895400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr7:26892800-26897200 Weak transcription Pancreas Pancrea
26 chr7:26893000-26895000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr7:26893000-26895200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr7:26893400-26894200 Weak transcription NHLF lung
29 chr7:26893400-26895200 Bivalent Enhancer Fetal Lung lung
30 chr7:26893400-26895200 Enhancers HUVEC blood vessel
31 chr7:26893600-26894400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr7:26893600-26894600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr7:26893600-26894600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr7:26893600-26894600 Weak transcription HMEC breast
35 chr7:26893600-26895600 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr7:26893600-26896000 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr7:26893600-26896200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr7:26893600-26896200 Weak transcription Primary B cells from peripheral blood blood
39 chr7:26893600-26897800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr7:26893800-26894200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr7:26894000-26894400 Weak transcription A549 lung
42 chr7:26894000-26894800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015