Variant report

Variant	rs5012512
Chromosome Location	chr7:26812428-26812429
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 254 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:252)

rs_ID	r²[population]
rs10085721	0.90[CHB][hapmap];0.91[JPT][hapmap];0.94[ASN][1000 genomes]
rs10224133	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10227140	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10227231	0.90[CHB][hapmap]
rs10227673	0.89[CHB][hapmap]
rs10227898	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs10231161	0.95[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10232697	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10232770	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10232778	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10237921	0.93[ASN][1000 genomes]
rs10238253	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10239608	0.89[CHB][hapmap];0.90[JPT][hapmap];0.93[ASN][1000 genomes]
rs10241952	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10242572	0.90[CHB][hapmap]
rs1024454	0.81[CEU][hapmap]
rs10245162	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10245367	0.93[ASN][1000 genomes]
rs10246641	0.93[ASN][1000 genomes]
rs10247509	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10249824	0.90[ASN][1000 genomes]
rs10250223	0.94[ASN][1000 genomes]
rs10255249	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10256250	0.90[CHB][hapmap]
rs10256561	0.90[CHB][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs10256799	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10261915	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10263118	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10267950	0.90[CHB][hapmap]
rs10269731	0.90[CHB][hapmap];0.91[JPT][hapmap];0.94[ASN][1000 genomes]
rs10270187	0.90[CHB][hapmap]
rs10272190	0.90[CHB][hapmap]
rs10272457	0.90[CHB][hapmap]
rs10273468	0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10276471	0.90[CHB][hapmap]
rs10276636	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10281261	0.90[CHB][hapmap]
rs1030644	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10486483	0.89[CHB][hapmap]
rs10486485	0.90[CHB][hapmap]
rs10807834	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10951145	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10951149	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1123156	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs1123157	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1123158	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11764558	0.81[CEU][hapmap];0.83[AFR][1000 genomes]
rs11770043	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11770344	0.81[CEU][hapmap]
rs11772673	0.89[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs11773029	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11773050	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12532339	0.93[ASN][1000 genomes]
rs12532796	0.90[CHB][hapmap]
rs12534899	0.89[CHB][hapmap]
rs12535078	0.93[ASN][1000 genomes]
rs12535784	0.90[CHB][hapmap]
rs12536560	0.90[CHB][hapmap]
rs12537323	0.89[CHB][hapmap]
rs12540388	0.90[CHB][hapmap]
rs12668948	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12700754	0.81[CEU][hapmap]
rs12700755	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12700756	0.83[AFR][1000 genomes]
rs12700757	0.81[CEU][hapmap]
rs12700758	0.92[CEU][hapmap];0.84[JPT][hapmap];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12700759	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12700760	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12700761	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12700762	0.81[CEU][hapmap];0.84[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs13186	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13229947	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs13234201	1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs13234336	1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs1327988	0.89[CHB][hapmap]
rs1327989	0.90[CHB][hapmap]
rs13438513	0.89[CHB][hapmap]
rs13438514	0.89[CHB][hapmap]
rs1468203	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs1548022	0.81[CEU][hapmap];0.82[EUR][1000 genomes]
rs1548478	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1548479	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1548480	0.82[AFR][1000 genomes]
rs1548481	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs17315775	0.89[CHB][hapmap]
rs17315929	0.89[CHB][hapmap]
rs17323934	0.89[CHB][hapmap]
rs17372780	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs1859101	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2015543	0.89[ASN][1000 genomes]
rs2015649	0.91[AFR][1000 genomes]
rs2017794	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2023819	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2030136	0.86[CHB][hapmap]
rs2031811	1.00[CHB][hapmap]
rs2082365	0.89[CHB][hapmap];0.90[JPT][hapmap]
rs2106905	0.90[CHB][hapmap]
rs212840	0.92[EUR][1000 genomes]
rs212842	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs212844	1.00[CEU][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs212846	0.90[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs212847	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs212849	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs212850	0.89[CHB][hapmap]
rs212852	0.95[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs212853	0.96[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs212854	0.83[CEU][hapmap]
rs212855	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs212857	0.89[CHB][hapmap]
rs212858	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs213527	0.88[YRI][hapmap]
rs2189016	0.82[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap]
rs2189017	0.90[CHB][hapmap]
rs2189019	0.89[CHB][hapmap]
rs2237328	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2282906	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2299102	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2391359	1.00[CEU][hapmap];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2391360	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2391362	0.90[CHB][hapmap]
rs2712242	0.89[CHB][hapmap]
rs2769365	0.91[JPT][hapmap]
rs28403911	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3757654	0.90[CHB][hapmap]
rs3801803	0.89[CHB][hapmap]
rs3801805	0.89[CHB][hapmap]
rs3801806	0.91[JPT][hapmap]
rs3801807	0.89[CHB][hapmap]
rs3801808	1.00[CHB][hapmap]
rs3801810	0.90[CHB][hapmap]
rs3801812	0.90[CHB][hapmap]
rs3801813	0.90[CHB][hapmap]
rs3801814	0.90[CHB][hapmap]
rs3801815	0.90[CHB][hapmap]
rs3801816	0.90[CHB][hapmap]
rs3801819	0.90[CHB][hapmap]
rs3801820	0.90[CHB][hapmap]
rs3801821	0.90[CHB][hapmap]
rs3801825	0.90[CHB][hapmap]
rs3801827	0.90[CHB][hapmap]
rs3801828	1.00[CHB][hapmap]
rs3801830	1.00[CHB][hapmap]
rs3801840	0.90[CHB][hapmap]
rs3801842	0.90[CHB][hapmap]
rs3801843	0.89[CHB][hapmap]
rs3801844	0.89[CHB][hapmap]
rs3801846	0.89[CHB][hapmap];0.81[JPT][hapmap];0.89[ASN][1000 genomes]
rs3801847	0.94[ASN][1000 genomes]
rs3801848	0.90[CHB][hapmap];0.94[ASN][1000 genomes]
rs3801850	0.90[CHB][hapmap]
rs3801853	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3801854	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3801855	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3801857	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs3801860	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3801864	0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3801866	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3801867	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3801868	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3801872	0.84[CEU][hapmap]
rs3823932	0.90[CHB][hapmap]
rs3823933	0.90[CHB][hapmap]
rs3823934	0.89[CHB][hapmap]
rs3823936	0.89[CHB][hapmap]
rs3823939	0.94[ASN][1000 genomes]
rs4345466	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4512299	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4573150	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4719877	0.90[CHB][hapmap]
rs4719879	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4722628	0.81[CEU][hapmap]
rs4722630	0.90[CHB][hapmap]
rs4722631	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4722633	0.89[ASN][1000 genomes]
rs4722634	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs503110	0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs55836768	0.93[ASN][1000 genomes]
rs55904994	0.93[ASN][1000 genomes]
rs56359409	0.93[ASN][1000 genomes]
rs570840	0.91[JPT][hapmap]
rs58988613	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs607099	0.91[JPT][hapmap]
rs6461961	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6461962	1.00[CHB][hapmap]
rs6461963	0.90[CHB][hapmap]
rs6461964	1.00[CEU][hapmap];0.90[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6461965	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6461971	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6461973	0.93[ASN][1000 genomes]
rs6461974	0.89[ASN][1000 genomes]
rs6461975	0.91[ASN][1000 genomes]
rs6461976	0.82[ASN][1000 genomes]
rs6461979	0.90[CHB][hapmap]
rs667841	0.91[JPT][hapmap];0.80[AMR][1000 genomes]
rs6943568	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6943623	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6944529	0.93[ASN][1000 genomes]
rs6948657	0.90[CHB][hapmap]
rs6951065	0.89[CHB][hapmap]
rs6964094	0.90[CHB][hapmap]
rs6964817	0.88[CHB][hapmap]
rs6965167	0.93[ASN][1000 genomes]
rs6970591	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6971397	0.89[CHB][hapmap]
rs6972378	0.90[CHB][hapmap]
rs6973237	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs727449	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs727450	0.81[CHB][hapmap]
rs73065526	0.93[ASN][1000 genomes]
rs744611	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs744612	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7457076	0.90[CHB][hapmap]
rs763616	0.88[CHB][hapmap];0.81[JPT][hapmap]
rs774367	0.81[ASN][1000 genomes]
rs7777316	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7777744	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7779604	0.93[ASN][1000 genomes]
rs7779843	0.93[ASN][1000 genomes]
rs7784206	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7784257	0.82[EUR][1000 genomes]
rs7784548	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7785832	0.90[CHB][hapmap]
rs7788165	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7791513	1.00[CHB][hapmap]
rs7793663	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7794399	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7795074	0.91[CEU][hapmap];0.90[CHB][hapmap];0.81[JPT][hapmap]
rs7795313	0.84[CEU][hapmap]
rs7798696	0.93[ASN][1000 genomes]
rs7799888	0.90[CHB][hapmap];0.90[JPT][hapmap];0.93[ASN][1000 genomes]
rs7802514	0.82[ASN][1000 genomes]
rs7802771	0.81[CEU][hapmap]
rs7802852	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7803699	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs7804356	0.89[CHB][hapmap]
rs7805766	0.90[CHB][hapmap]
rs7807640	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7810109	0.90[CHB][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs7810127	1.00[CHB][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs7810179	0.84[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs7811764	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs891874	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs891875	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs891876	1.00[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs934410	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9648018	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9648020	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9648021	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9648330	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9648331	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9770851	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs989250	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025538	chr7:26482342-27376045	Enhancers Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases
2	nsv538805	chr7:26482342-27376045	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	213 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs5012512	SKAP2	cis	Whole Blood	GTEx

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:26806600-26829400	Weak transcription	Adipose Nuclei	Adipose
2	chr7:26807800-26825400	Weak transcription	Lung	lung
3	chr7:26808000-26813400	Weak transcription	Ovary	ovary
4	chr7:26808000-26825200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr7:26808000-26854800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr7:26809000-26814600	Strong transcription	Primary B cells from peripheral blood	blood
7	chr7:26809000-26815000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr7:26809200-26813600	Strong transcription	Monocytes-CD14+_RO01746	blood
9	chr7:26809400-26816600	Strong transcription	Primary B cells from cord blood	blood
10	chr7:26809600-26824600	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr7:26810200-26814800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr7:26810400-26829000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr7:26810600-26813000	Weak transcription	Fetal Stomach	stomach
14	chr7:26810600-26814200	Strong transcription	Primary monocytes fromperipheralblood	blood
15	chr7:26810600-26835200	Weak transcription	Spleen	Spleen
16	chr7:26811600-26812800	Strong transcription	Primary hematopoietic stem cells	blood
17	chr7:26811800-26812800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr7:26812000-26812800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
19	chr7:26812000-26813000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
20	chr7:26812000-26813000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
21	chr7:26812200-26813000	Strong transcription	Duodenum Smooth Muscle	Duodenum
22	chr7:26812200-26820400	Weak transcription	Fetal Lung	lung
23	chr7:26812400-26819000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr7:26812400-26822200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr7:26812400-26849000	Weak transcription	Primary neutrophils fromperipheralblood	blood

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