Variant report

Variant	rs12584109
Chromosome Location	chr13:110506106-110506107
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10454514	0.80[EUR][1000 genomes]
rs10454541	0.80[EUR][1000 genomes]
rs10454542	0.80[EUR][1000 genomes]
rs12583717	0.80[EUR][1000 genomes]
rs12586001	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs168057	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs336222	0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs336224	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs336225	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs336234	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs444033	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57965758	0.88[EUR][1000 genomes]
rs58769110	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59174973	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60260995	0.88[EUR][1000 genomes]
rs60407269	0.88[EUR][1000 genomes]
rs60666848	0.88[EUR][1000 genomes]
rs7333538	0.88[EUR][1000 genomes]
rs7338690	0.81[EUR][1000 genomes]
rs73608761	0.80[EUR][1000 genomes]
rs73608768	0.81[EUR][1000 genomes]
rs73610814	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73610880	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73610891	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7994334	0.80[EUR][1000 genomes]
rs7998532	0.88[EUR][1000 genomes]
rs7999530	0.88[EUR][1000 genomes]
rs9559669	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9583432	0.81[EUR][1000 genomes]
rs9587993	0.88[EUR][1000 genomes]
rs9587995	0.88[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110505600-110506200	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr13:110506000-110509800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr13:110506000-110509800	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr13:110506000-110510000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr13:110506000-110510400	Weak transcription	HUES48 Cell Line	embryonic stem cell

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