Variant report

Variant	rs59174973
Chromosome Location	chr13:110509402-110509403
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10454514	0.80[EUR][1000 genomes]
rs10454541	0.80[EUR][1000 genomes]
rs10454542	0.80[EUR][1000 genomes]
rs12583717	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12584109	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12586001	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs168057	0.80[EUR][1000 genomes]
rs336222	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs336224	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs336225	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs336234	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs444033	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57965758	0.88[EUR][1000 genomes]
rs58769110	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60260995	0.88[EUR][1000 genomes]
rs60407269	0.88[EUR][1000 genomes]
rs60666848	0.88[EUR][1000 genomes]
rs60710406	0.82[AMR][1000 genomes]
rs7333538	0.88[EUR][1000 genomes]
rs7338690	0.81[EUR][1000 genomes]
rs73608761	0.80[EUR][1000 genomes]
rs73608768	0.81[EUR][1000 genomes]
rs73610814	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73610880	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73610891	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7994334	0.80[EUR][1000 genomes]
rs7998532	0.88[EUR][1000 genomes]
rs7999530	0.88[EUR][1000 genomes]
rs9559669	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9583432	0.81[EUR][1000 genomes]
rs9587993	0.88[EUR][1000 genomes]
rs9587995	0.88[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110506000-110509800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr13:110506000-110509800	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr13:110506000-110510000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr13:110506000-110510400	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr13:110507000-110511600	Weak transcription	Psoas Muscle	Psoas

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links