Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12583646	0.95[ASN][1000 genomes]
rs12583817	0.97[ASN][1000 genomes]
rs12584389	1.00[CEU][hapmap];0.92[CHD][hapmap];0.91[JPT][hapmap];0.85[ASN][1000 genomes]
rs12584683	0.90[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12585395	1.00[CEU][hapmap];0.92[CHD][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs1335287	0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs1414111	0.96[ASN][1000 genomes]
rs17071815	0.96[ASN][1000 genomes]
rs56336080	0.94[AFR][1000 genomes]
rs57650273	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7330531	0.96[ASN][1000 genomes]
rs74099682	0.90[AFR][1000 genomes]
rs74099685	0.90[AFR][1000 genomes]
rs74099688	0.94[ASN][1000 genomes]
rs74099689	0.90[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs74099690	0.92[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs74099692	0.98[AFR][1000 genomes]
rs74099693	1.00[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs74099696	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs74099697	0.98[AFR][1000 genomes]
rs74099698	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs74099699	1.00[AFR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900588	chr13:80216846-80421340	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv900590	chr13:80342186-80421340	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:80357000-80370400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr13:80357600-80362200	Weak transcription	HUVEC	blood vessel
3	chr13:80359400-80361200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr13:80359800-80360800	Enhancers	Muscle Satellite Cultured Cells	--
5	chr13:80360400-80360600	Enhancers	HSMMtube	muscle
6	chr13:80360400-80361000	Enhancers	HSMM	muscle

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