Variant report
| Variant | rs12593246 |
|---|---|
| Chromosome Location | chr15:73896588-73896589 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:73892200-73897400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 2 | chr15:73893200-73897200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 3 | chr15:73894000-73897000 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 4 | chr15:73894200-73896600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 5 | chr15:73894400-73896800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 6 | chr15:73894400-73901600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 7 | chr15:73894600-73897400 | Enhancers | Fetal Heart | heart |
| 8 | chr15:73894800-73896600 | Enhancers | Fetal Brain Female | brain |
| 9 | chr15:73895000-73897400 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 10 | chr15:73895000-73898200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 11 | chr15:73895000-73898800 | Enhancers | Rectal Smooth Muscle | rectum |
| 12 | chr15:73895000-73910000 | Weak transcription | Hela-S3 | cervix |
| 13 | chr15:73895000-73924400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 14 | chr15:73895200-73896600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 15 | chr15:73895200-73896600 | Weak transcription | Lung | lung |
| 16 | chr15:73895200-73896600 | Weak transcription | Pancreas | Pancrea |
| 17 | chr15:73895200-73897000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 18 | chr15:73895200-73898200 | Weak transcription | Ovary | ovary |
| 19 | chr15:73895200-73899200 | Weak transcription | Aorta | Aorta |
| 20 | chr15:73895200-73899400 | Weak transcription | Fetal Muscle Leg | muscle |
| 21 | chr15:73895200-73900400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 22 | chr15:73895200-73902600 | Weak transcription | Fetal Stomach | stomach |
| 23 | chr15:73895200-73921400 | Weak transcription | Fetal Thymus | thymus |
| 24 | chr15:73895200-73924200 | Weak transcription | Esophagus | oesophagus |
| 25 | chr15:73895400-73897200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 26 | chr15:73895400-73897200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 27 | chr15:73895400-73897800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 28 | chr15:73895400-73898200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 29 | chr15:73895400-73898400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr15:73895400-73899200 | Weak transcription | Right Atrium | heart |
| 31 | chr15:73895400-73899600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 32 | chr15:73895400-73901000 | Weak transcription | Right Ventricle | heart |
| 33 | chr15:73895400-73902400 | Weak transcription | Thymus | Thymus |
| 34 | chr15:73895400-73904000 | Weak transcription | Spleen | Spleen |
| 35 | chr15:73895400-73922400 | Weak transcription | Colonic Mucosa | Colon |
| 36 | chr15:73895600-73896800 | Genic enhancers | Fetal Intestine Small | intestine |
| 37 | chr15:73895600-73897200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 38 | chr15:73895600-73897200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 39 | chr15:73895600-73897400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 40 | chr15:73895600-73898000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 41 | chr15:73895600-73898200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 42 | chr15:73895600-73898200 | Weak transcription | Adipose Nuclei | Adipose |
| 43 | chr15:73895600-73898200 | Weak transcription | Osteobl | bone |
| 44 | chr15:73895600-73898400 | Weak transcription | Small Intestine | intestine |
| 45 | chr15:73895600-73899200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 46 | chr15:73895600-73899200 | Weak transcription | Gastric | stomach |
| 47 | chr15:73895600-73899400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 48 | chr15:73895600-73899400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr15:73895600-73899400 | Weak transcription | HepG2 | liver |
| 50 | chr15:73895600-73899800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
