The 2.0 version of rSNPBase

Variant report

Variant rs12597529
Chromosome Location chr16:65005462-65005463
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:64985000-65005800 Weak transcription Aorta Aorta
2 chr16:64985000-65011000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr16:64985400-65005800 Weak transcription Spleen Spleen
4 chr16:64985400-65015200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr16:64991400-65032600 Weak transcription Rectal Smooth Muscle rectum
6 chr16:64998000-65024800 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr16:64998400-65014800 Weak transcription HUVEC blood vessel
8 chr16:64999200-65010200 Strong transcription HSMM muscle
9 chr16:64999200-65017800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr16:64999200-65017800 Strong transcription NH-A brain
11 chr16:65000800-65051000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr16:65001200-65006800 Strong transcription Stomach Smooth Muscle stomach
13 chr16:65001200-65007000 Strong transcription Muscle Satellite Cultured Cells --
14 chr16:65001200-65012600 Strong transcription Fetal Lung lung
15 chr16:65002400-65015200 Weak transcription Left Ventricle heart
16 chr16:65002600-65005800 Weak transcription Fetal Stomach stomach
17 chr16:65002600-65016000 Weak transcription Brain Angular Gyrus brain
18 chr16:65003000-65006200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
19 chr16:65003000-65007400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr16:65003000-65008400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr16:65003200-65008400 Strong transcription NHLF lung
22 chr16:65003400-65006800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr16:65003400-65034000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr16:65003600-65005800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr16:65003600-65006800 Strong transcription NHDF-Ad bronchial
26 chr16:65003800-65006600 Strong transcription Ovary ovary
27 chr16:65003800-65016000 Weak transcription Brain Hippocampus Middle brain
28 chr16:65004000-65006400 Strong transcription HUES64 Cell Line embryonic stem cell
29 chr16:65004000-65006600 Weak transcription Esophagus oesophagus
30 chr16:65004000-65006800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr16:65004000-65007000 Strong transcription Duodenum Smooth Muscle Duodenum
32 chr16:65004200-65005800 Strong transcription Brain Cingulate Gyrus brain
33 chr16:65004200-65006600 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr16:65004200-65006600 Strong transcription Brain Inferior Temporal Lobe brain
35 chr16:65004200-65006600 Strong transcription Fetal Adrenal Gland Adrenal Gland
36 chr16:65004200-65006800 Strong transcription Brain Anterior Caudate brain
37 chr16:65004200-65006800 Strong transcription HSMMtube muscle
38 chr16:65004200-65007000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr16:65004200-65008800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr16:65004200-65009600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr16:65004200-65017400 Strong transcription Osteobl bone
42 chr16:65004400-65005800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr16:65004400-65006600 Strong transcription Placenta Amnion Placenta Amnion
44 chr16:65004400-65006600 Strong transcription HMEC breast
45 chr16:65004400-65007000 Strong transcription Fetal Intestine Large intestine
46 chr16:65004400-65011800 Strong transcription Fetal Muscle Leg muscle
47 chr16:65004600-65006200 Strong transcription Fetal Brain Female brain
48 chr16:65004600-65013400 Weak transcription Right Ventricle heart
49 chr16:65004800-65009200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr16:65004800-65009400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015