The 2.0 version of rSNPBase

Variant report

Variant rs35178
Chromosome Location chr16:65041770-65041771
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:65000800-65051000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr16:65017200-65041800 Weak transcription Colon Smooth Muscle Colon
3 chr16:65023400-65043200 Strong transcription Fetal Lung lung
4 chr16:65025800-65051400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr16:65032200-65043400 Weak transcription Fetal Brain Male brain
6 chr16:65035200-65042000 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr16:65036000-65051400 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr16:65036400-65043400 Weak transcription Brain Substantia Nigra brain
9 chr16:65036400-65043600 Weak transcription Brain Hippocampus Middle brain
10 chr16:65036600-65043600 Weak transcription Brain Angular Gyrus brain
11 chr16:65037000-65043800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr16:65037000-65044000 Strong transcription Osteobl bone
13 chr16:65037600-65042000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr16:65037800-65044400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr16:65039000-65043600 Weak transcription Brain Anterior Caudate brain
16 chr16:65039000-65043800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr16:65039000-65043800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr16:65039000-65061200 Weak transcription Aorta Aorta
19 chr16:65039000-65089600 Weak transcription Fetal Intestine Large intestine
20 chr16:65039200-65068800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr16:65039400-65043600 Weak transcription Brain Cingulate Gyrus brain
22 chr16:65039400-65043600 Weak transcription Fetal Brain Female brain
23 chr16:65039400-65050800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr16:65039600-65043600 Weak transcription Brain Germinal Matrix brain
25 chr16:65039600-65045800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr16:65039600-65049000 Weak transcription HUES6 Cell Line embryonic stem cell
27 chr16:65039600-65079800 Weak transcription Fetal Muscle Trunk muscle
28 chr16:65039800-65057400 Weak transcription Placenta Amnion Placenta Amnion
29 chr16:65040000-65044000 Weak transcription Spleen Spleen
30 chr16:65040000-65049800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr16:65040200-65045800 Weak transcription Muscle Satellite Cultured Cells --
32 chr16:65040400-65043400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr16:65040400-65049800 Weak transcription Stomach Smooth Muscle stomach
34 chr16:65040600-65041800 Weak transcription NH-A brain
35 chr16:65040600-65043800 Weak transcription Fetal Muscle Leg muscle
36 chr16:65040600-65045800 Weak transcription HSMMtube muscle
37 chr16:65040600-65086000 Weak transcription HMEC breast
38 chr16:65040800-65043800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr16:65041000-65045600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr16:65041000-65045800 Weak transcription Ovary ovary
41 chr16:65041000-65059200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr16:65041200-65072400 Weak transcription Fetal Kidney kidney
43 chr16:65041400-65045800 Weak transcription HSMM muscle
44 chr16:65041400-65045800 Weak transcription NHLF lung
45 chr16:65041600-65042400 Weak transcription NHDF-Ad bronchial
46 chr16:65041600-65045800 Weak transcription Fetal Adrenal Gland Adrenal Gland
47 chr16:65041600-65046000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr16:65041600-65047000 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015