Variant report

Variant rs40115
Chromosome Location chr16:65014909-65014910
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:64985400-65015200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr16:64991400-65032600 Weak transcription Rectal Smooth Muscle rectum
3 chr16:64998000-65024800 Strong transcription Breast Myoepithelial Primary Cells Breast
4 chr16:64999200-65017800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr16:64999200-65017800 Strong transcription NH-A brain
6 chr16:65000800-65051000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr16:65002400-65015200 Weak transcription Left Ventricle heart
8 chr16:65002600-65016000 Weak transcription Brain Angular Gyrus brain
9 chr16:65003400-65034000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr16:65003800-65016000 Weak transcription Brain Hippocampus Middle brain
11 chr16:65004200-65017400 Strong transcription Osteobl bone
12 chr16:65004800-65027600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr16:65005200-65016000 Weak transcription Psoas Muscle Psoas
14 chr16:65005800-65017200 Weak transcription Brain Cingulate Gyrus brain
15 chr16:65006400-65017800 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr16:65006600-65015000 Weak transcription Aorta Aorta
17 chr16:65006600-65015600 Weak transcription HMEC breast
18 chr16:65006600-65016000 Weak transcription Placenta Placenta
19 chr16:65006600-65017400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr16:65006600-65020600 Weak transcription Brain Germinal Matrix brain
21 chr16:65006600-65021000 Weak transcription Placenta Amnion Placenta Amnion
22 chr16:65006600-65024800 Weak transcription Spleen Spleen
23 chr16:65006800-65017400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr16:65007000-65020200 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr16:65007000-65020800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr16:65008600-65024000 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr16:65009600-65017400 Weak transcription Fetal Brain Male brain
28 chr16:65010400-65016000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr16:65010600-65015400 Weak transcription Muscle Satellite Cultured Cells --
30 chr16:65011000-65015800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr16:65011200-65016200 Strong transcription HSMMtube muscle
32 chr16:65011800-65016000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr16:65012200-65015400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr16:65012200-65017200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr16:65012200-65017400 Strong transcription Fetal Stomach stomach
36 chr16:65013400-65017200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr16:65013400-65018000 Strong transcription Fetal Lung lung
38 chr16:65013600-65015000 Strong transcription Brain Anterior Caudate brain
39 chr16:65013600-65015000 Strong transcription Fetal Brain Female brain
40 chr16:65013600-65015600 Strong transcription Stomach Smooth Muscle stomach
41 chr16:65013600-65016200 Strong transcription Fetal Adrenal Gland Adrenal Gland
42 chr16:65013600-65016800 Strong transcription NHDF-Ad bronchial
43 chr16:65013800-65016200 Strong transcription Fetal Muscle Leg muscle
44 chr16:65013800-65017600 Strong transcription HSMM muscle
45 chr16:65014000-65015600 Strong transcription Fetal Muscle Trunk muscle
46 chr16:65014200-65015200 Strong transcription Brain Inferior Temporal Lobe brain
47 chr16:65014200-65015600 Strong transcription Ovary ovary
48 chr16:65014200-65016200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr16:65014200-65016800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr16:65014200-65018000 Enhancers Fetal Heart heart

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