The 2.0 version of rSNPBase

Variant report

Variant rs62042237
Chromosome Location chr16:65065307-65065308
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:65039000-65089600 Weak transcription Fetal Intestine Large intestine
2 chr16:65039200-65068800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr16:65039600-65079800 Weak transcription Fetal Muscle Trunk muscle
4 chr16:65040600-65086000 Weak transcription HMEC breast
5 chr16:65041200-65072400 Weak transcription Fetal Kidney kidney
6 chr16:65044600-65069000 Weak transcription Brain Germinal Matrix brain
7 chr16:65046400-65075600 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr16:65047200-65078400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr16:65051000-65071200 Weak transcription Stomach Smooth Muscle stomach
10 chr16:65052200-65070800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr16:65052800-65068800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr16:65053000-65069000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr16:65056800-65072800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr16:65058000-65066600 Weak transcription Fetal Stomach stomach
15 chr16:65058600-65104400 Weak transcription Placenta Amnion Placenta Amnion
16 chr16:65058800-65069200 Weak transcription Fetal Brain Female brain
17 chr16:65059000-65068000 Weak transcription Spleen Spleen
18 chr16:65059200-65068200 Weak transcription NH-A brain
19 chr16:65059400-65066200 Weak transcription Muscle Satellite Cultured Cells --
20 chr16:65059800-65078400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr16:65060600-65070800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr16:65062200-65069600 Weak transcription Fetal Muscle Leg muscle
23 chr16:65062400-65074800 Weak transcription Aorta Aorta
24 chr16:65062600-65065400 Enhancers Brain Hippocampus Middle brain
25 chr16:65062600-65068600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr16:65062600-65071200 Weak transcription NHLF lung
27 chr16:65062800-65066800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr16:65062800-65068600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr16:65063800-65065800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr16:65063800-65067000 Enhancers Brain Anterior Caudate brain
31 chr16:65063800-65071400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr16:65063800-65071400 Weak transcription Fetal Brain Male brain
33 chr16:65064000-65069800 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr16:65064200-65065600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr16:65064200-65066200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr16:65064600-65065800 Strong transcription HSMMtube muscle
37 chr16:65064800-65066200 Weak transcription Ovary ovary
38 chr16:65064800-65071400 Weak transcription Placenta Placenta
39 chr16:65065000-65066200 Strong transcription HSMM muscle
40 chr16:65065000-65069000 Weak transcription Brain Inferior Temporal Lobe brain
41 chr16:65065000-65071200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr16:65065200-65065600 Strong transcription Osteobl bone
43 chr16:65065200-65065800 Strong transcription NHDF-Ad bronchial
44 chr16:65065200-65066000 Strong transcription Fetal Lung lung
45 chr16:65065200-65069000 Weak transcription Brain Angular Gyrus brain
46 chr16:65065200-65070200 Weak transcription Brain Substantia Nigra brain
47 chr16:65065200-65071000 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015