Variant report

Variant rs12661378
Chromosome Location chr6:37795946-37795947
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37789000-37796400 Enhancers Primary T helper cells fromperipheralblood blood
2 chr6:37789400-37800000 Enhancers Primary T helper cells PMA-I stimulated --
3 chr6:37790800-37799200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr6:37791000-37798000 Weak transcription HSMM muscle
5 chr6:37791000-37799200 Weak transcription Esophagus oesophagus
6 chr6:37791000-37800400 Weak transcription Thymus Thymus
7 chr6:37791200-37798000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr6:37791200-37800000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr6:37791200-37820000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr6:37791400-37796000 Enhancers Liver Liver
11 chr6:37791400-37796400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:37791400-37799200 Weak transcription Brain Cingulate Gyrus brain
13 chr6:37791400-37799200 Weak transcription Pancreas Pancrea
14 chr6:37791400-37799400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr6:37791400-37799400 Weak transcription Aorta Aorta
16 chr6:37791400-37800400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr6:37791400-37800400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr6:37791400-37801800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr6:37791400-37801800 Weak transcription Fetal Brain Female brain
20 chr6:37791400-37801800 Weak transcription A549 lung
21 chr6:37791400-37810200 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr6:37791400-37813400 Weak transcription Stomach Smooth Muscle stomach
23 chr6:37791400-37816000 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr6:37791600-37797400 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr6:37791600-37797400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr6:37791600-37797400 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr6:37791600-37798200 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr6:37791600-37799200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr6:37791600-37800000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr6:37791600-37801400 Weak transcription Brain Germinal Matrix brain
31 chr6:37792000-37800400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr6:37792400-37796200 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr6:37792400-37800400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr6:37792400-37801800 Weak transcription Fetal Brain Male brain
35 chr6:37793200-37796000 Enhancers Primary T cells from cord blood blood
36 chr6:37793200-37796000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr6:37793200-37796200 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr6:37793200-37796800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr6:37793200-37799000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr6:37793400-37796200 Enhancers Muscle Satellite Cultured Cells --
41 chr6:37793400-37796200 Enhancers Duodenum Mucosa Duodenum
42 chr6:37793400-37796400 Enhancers Primary neutrophils fromperipheralblood blood
43 chr6:37793600-37796400 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr6:37793800-37796400 Enhancers Fetal Adrenal Gland Adrenal Gland
45 chr6:37793800-37801600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr6:37793800-37813600 Weak transcription NH-A brain
47 chr6:37794000-37796000 Enhancers Right Ventricle heart
48 chr6:37794000-37796200 Enhancers Skeletal Muscle Male skeletal muscle
49 chr6:37794000-37819800 Weak transcription Rectal Smooth Muscle rectum
50 chr6:37794200-37797400 Weak transcription Osteobl bone

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