Variant report

Variant rs12978866
Chromosome Location chr19:23591823-23591824
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23578200-23598000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr19:23578400-23592200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr19:23578400-23597600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr19:23578600-23597800 Weak transcription Fetal Stomach stomach
5 chr19:23582000-23594000 Enhancers Fetal Intestine Large intestine
6 chr19:23582600-23597600 Weak transcription Fetal Brain Female brain
7 chr19:23583800-23597600 Weak transcription Fetal Lung lung
8 chr19:23585400-23597400 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr19:23585600-23597600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr19:23585800-23597800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr19:23586800-23597800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:23587000-23592400 Weak transcription Colonic Mucosa Colon
13 chr19:23587000-23598000 Weak transcription Pancreas Pancrea
14 chr19:23587200-23593000 Weak transcription Stomach Mucosa stomach
15 chr19:23587600-23598200 Weak transcription Right Atrium heart
16 chr19:23587800-23597600 Weak transcription Brain Germinal Matrix brain
17 chr19:23588000-23592400 Weak transcription HepG2 liver
18 chr19:23588200-23597600 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr19:23589800-23597400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr19:23590000-23596800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr19:23590200-23597400 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr19:23591000-23597400 Weak transcription H9 Cell Line embryonic stem cell
23 chr19:23591000-23597400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr19:23591000-23597400 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr19:23591000-23597400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr19:23591200-23592400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr19:23591200-23596800 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr19:23591200-23597200 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr19:23591200-23597400 Weak transcription H1 Cell Line embryonic stem cell
30 chr19:23591200-23597400 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr19:23591200-23597600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:23591600-23593000 Enhancers Rectal Mucosa Donor 29 rectum
33 chr19:23591600-23593000 Enhancers Sigmoid Colon Sigmoid Colon
34 chr19:23591800-23592000 Enhancers Fetal Intestine Small intestine
35 chr19:23591800-23592000 Enhancers Rectal Mucosa Donor 31 rectum
36 chr19:23591800-23592200 Enhancers Duodenum Mucosa Duodenum
37 chr19:23591800-23592800 Enhancers Small Intestine intestine

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