Variant report

Variant rs71333885
Chromosome Location chr19:23570297-23570298
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23513200-23570400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23544000-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:23549200-23577000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:23549600-23576000 Weak transcription Hela-S3 cervix
5 chr19:23551600-23576400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr19:23552800-23576000 ZNF genes & repeats Dnd41 blood
7 chr19:23553000-23576400 ZNF genes & repeats Primary hematopoietic stem cells blood
8 chr19:23553000-23576800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
9 chr19:23553000-23577000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
10 chr19:23555600-23576800 Weak transcription H9 Cell Line embryonic stem cell
11 chr19:23557200-23576600 Weak transcription H1 Cell Line embryonic stem cell
12 chr19:23558200-23573200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
13 chr19:23559400-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr19:23559600-23570600 ZNF genes & repeats Primary B cells from cord blood blood
15 chr19:23561400-23576600 ZNF genes & repeats Fetal Brain Female brain
16 chr19:23561600-23570400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
17 chr19:23561600-23570600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
18 chr19:23562600-23571000 ZNF genes & repeats Fetal Intestine Large intestine
19 chr19:23563400-23575400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr19:23563600-23571200 Weak transcription Colon Smooth Muscle Colon
21 chr19:23564200-23576600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
22 chr19:23565400-23576400 ZNF genes & repeats Primary T cells from cord blood blood
23 chr19:23565800-23573200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr19:23566200-23572000 Weak transcription Fetal Heart heart
25 chr19:23566400-23572800 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr19:23566600-23574200 Weak transcription Stomach Mucosa stomach
27 chr19:23567200-23577200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr19:23567600-23575000 Weak transcription Psoas Muscle Psoas
29 chr19:23567800-23571200 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr19:23567800-23572000 Weak transcription Right Ventricle heart
31 chr19:23567800-23576000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr19:23567800-23576600 Weak transcription Right Atrium heart
33 chr19:23567800-23576800 Weak transcription NH-A brain
34 chr19:23567800-23577000 Weak transcription Brain Angular Gyrus brain
35 chr19:23567800-23577200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr19:23568000-23570400 Weak transcription Left Ventricle heart
37 chr19:23568000-23570400 Weak transcription Ovary ovary
38 chr19:23568000-23571000 Weak transcription Placenta Amnion Placenta Amnion
39 chr19:23568000-23571200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr19:23568000-23571200 Weak transcription Stomach Smooth Muscle stomach
41 chr19:23568000-23571400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr19:23568000-23572000 Weak transcription Aorta Aorta
43 chr19:23568000-23573000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr19:23568000-23575400 Weak transcription Brain Hippocampus Middle brain
45 chr19:23568000-23575400 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr19:23568000-23575600 Weak transcription Rectal Smooth Muscle rectum
47 chr19:23568000-23575600 Weak transcription HSMMtube muscle
48 chr19:23568000-23576200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr19:23568000-23576800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr19:23568000-23577200 Weak transcription Gastric stomach

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