Variant report

Variant rs295399
Chromosome Location chr19:23522345-23522346
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23506000-23548400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr19:23510800-23522600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
3 chr19:23511000-23522800 ZNF genes & repeats Fetal Lung lung
4 chr19:23511000-23523400 ZNF genes & repeats Liver Liver
5 chr19:23512000-23523400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr19:23512400-23540400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:23512400-23548400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:23513200-23570400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr19:23513600-23527400 Weak transcription Osteobl bone
10 chr19:23515400-23522400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
11 chr19:23515400-23523000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
12 chr19:23515800-23522600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr19:23516400-23522800 ZNF genes & repeats Primary T cells from cord blood blood
14 chr19:23516600-23522600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
15 chr19:23516800-23523400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
16 chr19:23517000-23522400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
17 chr19:23517000-23522800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
18 chr19:23518200-23522600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
19 chr19:23518200-23525200 ZNF genes & repeats Primary B cells from cord blood blood
20 chr19:23518400-23523400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
21 chr19:23518400-23535800 ZNF genes & repeats Dnd41 blood
22 chr19:23519200-23526200 Weak transcription HSMMtube muscle
23 chr19:23519400-23524600 Weak transcription Muscle Satellite Cultured Cells --
24 chr19:23519400-23524800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr19:23519400-23524800 Weak transcription HSMM muscle
26 chr19:23519400-23526400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr19:23519400-23527400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr19:23519400-23530000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr19:23519800-23526200 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr19:23519800-23526400 Weak transcription Pancreas Pancrea
31 chr19:23520000-23524600 Weak transcription Fetal Kidney kidney
32 chr19:23520000-23526400 Weak transcription Placenta Amnion Placenta Amnion
33 chr19:23520000-23527400 Weak transcription Stomach Smooth Muscle stomach
34 chr19:23520400-23522400 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
35 chr19:23521000-23522800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
36 chr19:23521000-23523400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
37 chr19:23521200-23522800 ZNF genes & repeats H1 Cell Line embryonic stem cell
38 chr19:23521400-23522600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr19:23521400-23522600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
40 chr19:23521400-23522800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr19:23521400-23522800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
42 chr19:23521400-23522800 ZNF genes & repeats Fetal Intestine Small intestine
43 chr19:23521400-23522800 ZNF genes & repeats Fetal Stomach stomach
44 chr19:23521400-23523400 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
45 chr19:23521400-23525000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
46 chr19:23521400-23525800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr19:23521600-23522400 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
48 chr19:23521600-23522600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr19:23521600-23522600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
50 chr19:23521600-23522600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin

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