Variant report

Variant rs296081
Chromosome Location chr19:23551242-23551243
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23513200-23570400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr19:23524400-23552200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
3 chr19:23524400-23570200 ZNF genes & repeats Liver Liver
4 chr19:23524600-23570000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
5 chr19:23529400-23556800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
6 chr19:23541200-23552400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr19:23544000-23552000 ZNF genes & repeats Dnd41 blood
8 chr19:23544000-23552200 ZNF genes & repeats Primary hematopoietic stem cells blood
9 chr19:23544000-23556000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
10 chr19:23544000-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:23544600-23552200 ZNF genes & repeats Primary B cells from cord blood blood
12 chr19:23544600-23552400 ZNF genes & repeats Primary T cells fromperipheralblood blood
13 chr19:23544600-23560600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
14 chr19:23544800-23552200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
15 chr19:23544800-23552400 ZNF genes & repeats Fetal Intestine Large intestine
16 chr19:23544800-23552400 ZNF genes & repeats Small Intestine intestine
17 chr19:23544800-23557000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
18 chr19:23544800-23558000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr19:23545000-23552000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
20 chr19:23546800-23552400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr19:23547200-23553400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr19:23548000-23552400 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
23 chr19:23548800-23552200 ZNF genes & repeats Brain Germinal Matrix brain
24 chr19:23548800-23552400 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
25 chr19:23548800-23552400 ZNF genes & repeats Colonic Mucosa Colon
26 chr19:23548800-23552400 ZNF genes & repeats Lung lung
27 chr19:23548800-23552400 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
28 chr19:23548800-23554000 ZNF genes & repeats H1 Cell Line embryonic stem cell
29 chr19:23548800-23556600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr19:23549000-23551400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr19:23549000-23552000 ZNF genes & repeats Primary T cells from cord blood blood
32 chr19:23549000-23552000 Strong transcription Placenta Amnion Placenta Amnion
33 chr19:23549000-23552200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
34 chr19:23549000-23552200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
35 chr19:23549000-23552200 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
36 chr19:23549000-23552200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
37 chr19:23549000-23552200 ZNF genes & repeats Brain Hippocampus Middle brain
38 chr19:23549000-23552400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
39 chr19:23549000-23554600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
40 chr19:23549000-23556800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
41 chr19:23549000-23557200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
42 chr19:23549000-23560400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr19:23549200-23552000 ZNF genes & repeats Fetal Lung lung
44 chr19:23549200-23552200 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr19:23549200-23552200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
46 chr19:23549200-23552200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
47 chr19:23549200-23552200 ZNF genes & repeats Adipose Nuclei Adipose
48 chr19:23549200-23552200 ZNF genes & repeats Placenta Placenta
49 chr19:23549200-23552200 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
50 chr19:23549200-23552200 ZNF genes & repeats GM12878-XiMat blood

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