Variant report

Variant rs295415
Chromosome Location chr19:23508893-23508894
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23490000-23514200 Weak transcription Stomach Smooth Muscle stomach
2 chr19:23491800-23512800 Weak transcription Left Ventricle heart
3 chr19:23494400-23518200 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:23496600-23512200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr19:23500400-23516600 Weak transcription Right Ventricle heart
6 chr19:23501200-23512600 Weak transcription Brain Cingulate Gyrus brain
7 chr19:23505200-23511000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr19:23506000-23509600 ZNF genes & repeats Fetal Lung lung
9 chr19:23506000-23522000 ZNF genes & repeats Adipose Nuclei Adipose
10 chr19:23506000-23548400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr19:23506200-23512600 Weak transcription Pancreas Pancrea
12 chr19:23506400-23515000 Weak transcription Brain Anterior Caudate brain
13 chr19:23506400-23522200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr19:23506600-23510000 ZNF genes & repeats Fetal Brain Female brain
15 chr19:23506600-23511000 Weak transcription Brain Hippocampus Middle brain
16 chr19:23506600-23518400 Weak transcription Brain Substantia Nigra brain
17 chr19:23506800-23513600 Weak transcription Fetal Heart heart
18 chr19:23507000-23514200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr19:23507200-23509400 ZNF genes & repeats Brain Germinal Matrix brain
20 chr19:23507400-23516600 Weak transcription Placenta Placenta
21 chr19:23507600-23514200 Weak transcription Muscle Satellite Cultured Cells --
22 chr19:23507800-23509600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr19:23507800-23509800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
24 chr19:23508000-23509400 Strong transcription Ovary ovary
25 chr19:23508000-23509600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
26 chr19:23508000-23509600 Strong transcription HSMMtube muscle
27 chr19:23508200-23517000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr19:23508400-23509800 ZNF genes & repeats Liver Liver
29 chr19:23508400-23518200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr19:23508400-23518400 Weak transcription Colon Smooth Muscle Colon
31 chr19:23508600-23509800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:23508600-23511000 Weak transcription Aorta Aorta
33 chr19:23508600-23518400 Weak transcription Brain Inferior Temporal Lobe brain
34 chr19:23508800-23509000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr19:23508800-23510800 Weak transcription Fetal Kidney kidney

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