Variant report
Variant | rs7245954 |
---|---|
Chromosome Location | chr19:23497942-23497943 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:4 , 50 per page) page:
1
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | CEBPB | chr19:23497450-23498187 | IMR90 | lung: | n/a | chr19:23497791-23497802 |
2 | CEBPB | chr19:23497414-23498155 | A549 | lung: | n/a | chr19:23497791-23497802 |
3 | CEBPB | chr19:23497501-23498224 | HepG2 | liver: | n/a | chr19:23497791-23497802 |
4 | ZEB1 | chr19:23497675-23497972 | HepG2 | liver: | n/a | n/a |
No data |
No data |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ZNF91 | TF binding region |
rs_ID | r2[population] |
---|---|
rs1020075 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11085576 | 0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11085578 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.88[YRI][hapmap];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11085579 | 0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11666772 | 0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11667068 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11667562 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11668151 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11668522 | 0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11669071 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11669196 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11669226 | 0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11669399 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11670003 | 1.00[ASN][1000 genomes] |
rs11670028 | 1.00[ASN][1000 genomes] |
rs11671028 | 0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11672733 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[YRI][hapmap];0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11673174 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11879776 | 0.88[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11882277 | 0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs11882589 | 0.88[CEU][hapmap] |
rs12151189 | 0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12611297 | 0.88[CEU][hapmap] |
rs12971750 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12973473 | 0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12973830 | 0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12973857 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12974550 | 0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12975761 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12976183 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12977305 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12977982 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.96[TSI][hapmap];0.84[YRI][hapmap];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12978866 | 0.83[CEU][hapmap] |
rs12978950 | 1.00[CEU][hapmap] |
rs12979525 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12979779 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12980317 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12981723 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12982024 | 0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12982501 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12983078 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12983222 | 0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12983283 | 0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12983293 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12984872 | 0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12985056 | 0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12985335 | 0.98[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs12985838 | 0.88[CEU][hapmap] |
rs1550238 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1600361 | 0.88[CEU][hapmap] |
rs17473980 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs17490758 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1816639 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1820675 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs1820676 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2009536 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2164786 | 0.87[GIH][hapmap];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs2434383 | 0.94[CEU][hapmap] |
rs2438154 | 0.88[CEU][hapmap] |
rs2640206 | 0.83[CEU][hapmap] |
rs295353 | 0.88[CEU][hapmap] |
rs295393 | 0.88[CEU][hapmap] |
rs296092 | 0.88[CEU][hapmap] |
rs34448243 | 0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs34614912 | 0.89[AMR][1000 genomes];0.84[ASN][1000 genomes] |
rs34937612 | 0.98[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs35367868 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs35477544 | 0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs35644212 | 0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs35662497 | 0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs35804934 | 0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs3906526 | 0.88[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs426564 | 0.88[CEU][hapmap] |
rs55738647 | 0.85[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs55812273 | 1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs56289642 | 0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs60535396 | 0.87[AMR][1000 genomes] |
rs610054 | 0.83[CEU][hapmap] |
rs621906 | 0.83[CEU][hapmap] |
rs628900 | 0.83[CEU][hapmap] |
rs629359 | 0.83[CEU][hapmap] |
rs638080 | 0.83[CEU][hapmap] |
rs6511433 | 0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7248969 | 0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7249300 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7249539 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7251830 | 0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7254865 | 0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap] |
rs7255296 | 0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs7255761 | 0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8103030 | 0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8103302 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8104021 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8104033 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8105269 | 0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8107251 | 0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8107390 | 0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8108073 | 0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8109399 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8109526 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8110310 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8110567 | 0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs8112646 | 0.87[CEU][hapmap];1.00[CHB][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv34470 | chr19:22922549-23659458 | ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 80 gene(s) | inside rSNPs | diseases |
2 | esv34907 | chr19:22922549-23683097 | Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 80 gene(s) | inside rSNPs | diseases |
3 | nsv9686 | chr19:22989454-23653750 | Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 76 gene(s) | inside rSNPs | diseases |
4 | nsv817826 | chr19:23000745-23620632 | Active TSS Strong transcription ZNF genes & repeats Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 75 gene(s) | inside rSNPs | diseases |
5 | esv3693269 | chr19:23000745-23652839 | Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 76 gene(s) | inside rSNPs | diseases |
6 | esv2758491 | chr19:23071299-23940467 | ZNF genes & repeats Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 87 gene(s) | inside rSNPs | diseases |
7 | nsv1065157 | chr19:23091826-23812323 | Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Enhancers Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
8 | nsv543959 | chr19:23091826-23812323 | Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 83 gene(s) | inside rSNPs | diseases |
9 | esv3429878 | chr19:23246650-23590744 | Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 52 gene(s) | inside rSNPs | diseases |
10 | esv3410568 | chr19:23246670-23590714 | Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 52 gene(s) | inside rSNPs | diseases |
11 | esv3433243 | chr19:23249108-23585814 | Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 44 gene(s) | inside rSNPs | diseases |
12 | esv3387823 | chr19:23265885-23590028 | ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 47 gene(s) | inside rSNPs | diseases |
13 | nsv579034 | chr19:23387788-23610784 | ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 43 gene(s) | inside rSNPs | diseases |
14 | nsv833790 | chr19:23405972-23557520 | ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
15 | esv3332495 | chr19:23451842-23598069 | Active TSS Strong transcription ZNF genes & repeats Genic enhancers Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 39 gene(s) | inside rSNPs | diseases |
16 | esv3319024 | chr19:23456003-23598068 | Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 39 gene(s) | inside rSNPs | diseases |
17 | esv3319025 | chr19:23456003-23598068 | Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 39 gene(s) | inside rSNPs | diseases |
18 | esv3447830 | chr19:23465035-23610690 | Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 36 gene(s) | inside rSNPs | diseases |
19 | esv3382338 | chr19:23476728-23631356 | Flanking Active TSS ZNF genes & repeats Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
20 | esv3323302 | chr19:23477342-23648545 | ZNF genes & repeats Weak transcription Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
21 | esv3523857 | chr19:23477614-23632199 | ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
22 | esv3523858 | chr19:23477614-23632199 | Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 34 gene(s) | inside rSNPs | diseases |
23 | esv3383110 | chr19:23495475-23503145 | ZNF genes & repeats Enhancers Weak transcription | TF binding regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:23486400-23508000 | Weak transcription | Ovary | ovary |
2 | chr19:23489800-23498200 | Weak transcription | Aorta | Aorta |
3 | chr19:23490000-23514200 | Weak transcription | Stomach Smooth Muscle | stomach |
4 | chr19:23490400-23500800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
5 | chr19:23491800-23508400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
6 | chr19:23491800-23512800 | Weak transcription | Left Ventricle | heart |
7 | chr19:23492400-23502600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
8 | chr19:23493400-23499800 | Enhancers | Placenta | Placenta |
9 | chr19:23494400-23518200 | Weak transcription | Placenta Amnion | Placenta Amnion |
10 | chr19:23496600-23512200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
11 | chr19:23496800-23498400 | ZNF genes & repeats | Fetal Brain Female | brain |