Variant report

Variant rs34448243
Chromosome Location chr19:23570469-23570470
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23544000-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:23549200-23577000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:23549600-23576000 Weak transcription Hela-S3 cervix
4 chr19:23551600-23576400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr19:23552800-23576000 ZNF genes & repeats Dnd41 blood
6 chr19:23553000-23576400 ZNF genes & repeats Primary hematopoietic stem cells blood
7 chr19:23553000-23576800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
8 chr19:23553000-23577000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr19:23555600-23576800 Weak transcription H9 Cell Line embryonic stem cell
10 chr19:23557200-23576600 Weak transcription H1 Cell Line embryonic stem cell
11 chr19:23558200-23573200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
12 chr19:23559400-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr19:23559600-23570600 ZNF genes & repeats Primary B cells from cord blood blood
14 chr19:23561400-23576600 ZNF genes & repeats Fetal Brain Female brain
15 chr19:23561600-23570600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
16 chr19:23562600-23571000 ZNF genes & repeats Fetal Intestine Large intestine
17 chr19:23563400-23575400 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr19:23563600-23571200 Weak transcription Colon Smooth Muscle Colon
19 chr19:23564200-23576600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
20 chr19:23565400-23576400 ZNF genes & repeats Primary T cells from cord blood blood
21 chr19:23565800-23573200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr19:23566200-23572000 Weak transcription Fetal Heart heart
23 chr19:23566400-23572800 Strong transcription HUES64 Cell Line embryonic stem cell
24 chr19:23566600-23574200 Weak transcription Stomach Mucosa stomach
25 chr19:23567200-23577200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr19:23567600-23575000 Weak transcription Psoas Muscle Psoas
27 chr19:23567800-23571200 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr19:23567800-23572000 Weak transcription Right Ventricle heart
29 chr19:23567800-23576000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr19:23567800-23576600 Weak transcription Right Atrium heart
31 chr19:23567800-23576800 Weak transcription NH-A brain
32 chr19:23567800-23577000 Weak transcription Brain Angular Gyrus brain
33 chr19:23567800-23577200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr19:23568000-23571000 Weak transcription Placenta Amnion Placenta Amnion
35 chr19:23568000-23571200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr19:23568000-23571200 Weak transcription Stomach Smooth Muscle stomach
37 chr19:23568000-23571400 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr19:23568000-23572000 Weak transcription Aorta Aorta
39 chr19:23568000-23573000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr19:23568000-23575400 Weak transcription Brain Hippocampus Middle brain
41 chr19:23568000-23575400 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr19:23568000-23575600 Weak transcription Rectal Smooth Muscle rectum
43 chr19:23568000-23575600 Weak transcription HSMMtube muscle
44 chr19:23568000-23576200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr19:23568000-23576800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr19:23568000-23577200 Weak transcription Gastric stomach
47 chr19:23568200-23572200 Weak transcription Brain Cingulate Gyrus brain
48 chr19:23568200-23573200 Strong transcription Placenta Placenta
49 chr19:23568200-23576000 Weak transcription Spleen Spleen
50 chr19:23568200-23577000 Weak transcription HUVEC blood vessel

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