Variant report

Variant rs55738647
Chromosome Location chr19:23573113-23573114
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23544000-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:23549200-23577000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:23549600-23576000 Weak transcription Hela-S3 cervix
4 chr19:23551600-23576400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr19:23552800-23576000 ZNF genes & repeats Dnd41 blood
6 chr19:23553000-23576400 ZNF genes & repeats Primary hematopoietic stem cells blood
7 chr19:23553000-23576800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
8 chr19:23553000-23577000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr19:23555600-23576800 Weak transcription H9 Cell Line embryonic stem cell
10 chr19:23557200-23576600 Weak transcription H1 Cell Line embryonic stem cell
11 chr19:23558200-23573200 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
12 chr19:23559400-23576400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr19:23561400-23576600 ZNF genes & repeats Fetal Brain Female brain
14 chr19:23563400-23575400 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr19:23564200-23576600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
16 chr19:23565400-23576400 ZNF genes & repeats Primary T cells from cord blood blood
17 chr19:23565800-23573200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr19:23566600-23574200 Weak transcription Stomach Mucosa stomach
19 chr19:23567200-23577200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr19:23567600-23575000 Weak transcription Psoas Muscle Psoas
21 chr19:23567800-23576000 Weak transcription Brain Inferior Temporal Lobe brain
22 chr19:23567800-23576600 Weak transcription Right Atrium heart
23 chr19:23567800-23576800 Weak transcription NH-A brain
24 chr19:23567800-23577000 Weak transcription Brain Angular Gyrus brain
25 chr19:23567800-23577200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr19:23568000-23575400 Weak transcription Brain Hippocampus Middle brain
27 chr19:23568000-23575400 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr19:23568000-23575600 Weak transcription Rectal Smooth Muscle rectum
29 chr19:23568000-23575600 Weak transcription HSMMtube muscle
30 chr19:23568000-23576200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr19:23568000-23576800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr19:23568000-23577200 Weak transcription Gastric stomach
33 chr19:23568200-23573200 Strong transcription Placenta Placenta
34 chr19:23568200-23576000 Weak transcription Spleen Spleen
35 chr19:23568200-23577000 Weak transcription HUVEC blood vessel
36 chr19:23568200-23577200 Weak transcription Esophagus oesophagus
37 chr19:23568200-23577200 Weak transcription Pancreas Pancrea
38 chr19:23568400-23573400 Weak transcription Colonic Mucosa Colon
39 chr19:23568600-23574200 Weak transcription NHDF-Ad bronchial
40 chr19:23569200-23576400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr19:23569600-23573400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
42 chr19:23569600-23575200 Weak transcription Brain Anterior Caudate brain
43 chr19:23569600-23576800 Weak transcription Brain Substantia Nigra brain
44 chr19:23569800-23576800 ZNF genes & repeats Brain Germinal Matrix brain
45 chr19:23570000-23573800 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr19:23570000-23574000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr19:23570000-23574200 Strong transcription Fetal Lung lung
48 chr19:23570000-23574400 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr19:23570000-23575600 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr19:23570200-23573200 ZNF genes & repeats Fetal Intestine Small intestine

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