Variant report

Variant rs11669399
Chromosome Location chr19:23520049-23520050
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23506000-23522000 ZNF genes & repeats Adipose Nuclei Adipose
2 chr19:23506000-23548400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr19:23506400-23522200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr19:23510800-23522600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
5 chr19:23511000-23522800 ZNF genes & repeats Fetal Lung lung
6 chr19:23511000-23523400 ZNF genes & repeats Liver Liver
7 chr19:23512000-23522000 ZNF genes & repeats Fetal Brain Female brain
8 chr19:23512000-23523400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr19:23512200-23521400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr19:23512400-23540400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr19:23512400-23548400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:23513200-23570400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr19:23513400-23522200 ZNF genes & repeats Duodenum Mucosa Duodenum
14 chr19:23513600-23527400 Weak transcription Osteobl bone
15 chr19:23513800-23520400 ZNF genes & repeats Brain Germinal Matrix brain
16 chr19:23513800-23521800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr19:23514200-23521000 ZNF genes & repeats Primary hematopoietic stem cells blood
18 chr19:23515200-23520400 ZNF genes & repeats Fetal Intestine Large intestine
19 chr19:23515400-23520400 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
20 chr19:23515400-23522400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
21 chr19:23515400-23523000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
22 chr19:23515800-23522600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr19:23516200-23520200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr19:23516400-23520600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr19:23516400-23522800 ZNF genes & repeats Primary T cells from cord blood blood
26 chr19:23516600-23522200 ZNF genes & repeats Primary B cells from peripheral blood blood
27 chr19:23516600-23522600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
28 chr19:23516800-23523400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
29 chr19:23517000-23522000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
30 chr19:23517000-23522400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
31 chr19:23517000-23522800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
32 chr19:23517600-23520400 ZNF genes & repeats Primary T cells fromperipheralblood blood
33 chr19:23517800-23520200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr19:23517800-23520400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
35 chr19:23518000-23520200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
36 chr19:23518000-23520600 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
37 chr19:23518200-23521200 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
38 chr19:23518200-23522600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
39 chr19:23518200-23525200 ZNF genes & repeats Primary B cells from cord blood blood
40 chr19:23518400-23521600 Weak transcription Placenta Placenta
41 chr19:23518400-23523400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
42 chr19:23518400-23535800 ZNF genes & repeats Dnd41 blood
43 chr19:23518800-23521600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr19:23519200-23520200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr19:23519200-23521800 ZNF genes & repeats NHEK skin
46 chr19:23519200-23526200 Weak transcription HSMMtube muscle
47 chr19:23519400-23521000 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr19:23519400-23521600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr19:23519400-23521600 Weak transcription Colonic Mucosa Colon
50 chr19:23519400-23521600 Weak transcription Left Ventricle heart

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