Variant report

Variant rs12983293
Chromosome Location chr19:23526789-23526790
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:23506000-23548400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr19:23512400-23540400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:23512400-23548400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:23513200-23570400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr19:23513600-23527400 Weak transcription Osteobl bone
6 chr19:23518400-23535800 ZNF genes & repeats Dnd41 blood
7 chr19:23519400-23527400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr19:23519400-23530000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr19:23520000-23527400 Weak transcription Stomach Smooth Muscle stomach
10 chr19:23521800-23527600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr19:23521800-23529400 Weak transcription Right Ventricle heart
12 chr19:23522600-23527600 Weak transcription Gastric stomach
13 chr19:23523000-23535600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
14 chr19:23524000-23527200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr19:23524000-23527400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr19:23524000-23548400 ZNF genes & repeats Duodenum Mucosa Duodenum
17 chr19:23524200-23527600 Weak transcription Ovary ovary
18 chr19:23524200-23548400 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr19:23524200-23548400 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr19:23524400-23527600 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr19:23524400-23535400 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr19:23524400-23535600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
23 chr19:23524400-23535600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
24 chr19:23524400-23535800 ZNF genes & repeats Primary hematopoietic stem cells blood
25 chr19:23524400-23535800 ZNF genes & repeats Fetal Lung lung
26 chr19:23524400-23552200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
27 chr19:23524400-23570200 ZNF genes & repeats Liver Liver
28 chr19:23524600-23535600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr19:23524600-23536400 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
30 chr19:23524600-23540200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
31 chr19:23524600-23546400 ZNF genes & repeats Fetal Brain Female brain
32 chr19:23524600-23547400 ZNF genes & repeats Adipose Nuclei Adipose
33 chr19:23524600-23547800 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
34 chr19:23524600-23570000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
35 chr19:23524800-23527400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr19:23524800-23527400 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr19:23524800-23540200 ZNF genes & repeats Primary T cells from cord blood blood
38 chr19:23525000-23527800 Weak transcription Muscle Satellite Cultured Cells --
39 chr19:23525000-23538000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr19:23525400-23531400 Weak transcription Colon Smooth Muscle Colon
41 chr19:23525400-23535800 ZNF genes & repeats Fetal Intestine Large intestine
42 chr19:23525600-23535600 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
43 chr19:23525600-23535600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
44 chr19:23525800-23527000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr19:23525800-23528400 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr19:23526000-23527800 ZNF genes & repeats NHEK skin
47 chr19:23526000-23529600 ZNF genes & repeats Primary T cells fromperipheralblood blood
48 chr19:23526000-23535400 ZNF genes & repeats Brain Germinal Matrix brain
49 chr19:23526000-23535600 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
50 chr19:23526000-23535600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast

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