Variant report

Variant rs12988017
Chromosome Location chr2:64071600-64071601
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:139 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64067000-64073200 Active TSS ES-WA7 Cell Line embryonic stem cell
2 chr2:64067000-64075800 Active TSS iPS-15b Cell Line embryonic stem cell
3 chr2:64067000-64076400 Active TSS ES-I3 Cell Line embryonic stem cell
4 chr2:64067200-64071600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr2:64067200-64071800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr2:64067200-64072000 Active TSS Aorta Aorta
7 chr2:64067200-64072000 Active TSS Fetal Muscle Trunk muscle
8 chr2:64067200-64072200 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr2:64067200-64072200 Active TSS Colonic Mucosa Colon
10 chr2:64067200-64072400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
11 chr2:64067200-64073200 Active TSS Left Ventricle heart
12 chr2:64067200-64073400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:64067400-64072200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
14 chr2:64067400-64074000 Active TSS H9 Cell Line embryonic stem cell
15 chr2:64067600-64071600 Active TSS Psoas Muscle Psoas
16 chr2:64067600-64071600 Active TSS NHLF lung
17 chr2:64067600-64072800 Active TSS HUES64 Cell Line embryonic stem cell
18 chr2:64067600-64074000 Active TSS Right Ventricle heart
19 chr2:64067800-64071600 Active TSS Skeletal Muscle Male skeletal muscle
20 chr2:64067800-64071800 Active TSS Fetal Muscle Leg muscle
21 chr2:64068000-64071600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:64069000-64071600 Active TSS Right Atrium heart
23 chr2:64069000-64071800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:64069000-64072800 Weak transcription Spleen Spleen
25 chr2:64069400-64072000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
26 chr2:64069400-64072000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:64069400-64072600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr2:64069400-64073400 Flanking Active TSS Adipose Nuclei Adipose
29 chr2:64069400-64074600 Transcr. at gene 5' and 3' Dnd41 blood
30 chr2:64069800-64073200 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
31 chr2:64070000-64072200 Enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr2:64070000-64073600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr2:64070000-64082800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:64070200-64072200 Enhancers Primary monocytes fromperipheralblood blood
35 chr2:64070200-64072600 Enhancers Primary T killer memory cells from peripheral blood blood
36 chr2:64070200-64076400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr2:64070200-64084600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr2:64070200-64103000 Weak transcription Gastric stomach
39 chr2:64070400-64071800 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr2:64070400-64071800 Active TSS Rectal Mucosa Donor 31 rectum
41 chr2:64070400-64072400 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr2:64070400-64075800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr2:64070600-64071600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:64070600-64071600 Enhancers Stomach Mucosa stomach
45 chr2:64070600-64071800 Enhancers Duodenum Mucosa Duodenum
46 chr2:64070600-64072000 Enhancers K562 blood
47 chr2:64070600-64072000 Flanking Active TSS NHEK skin
48 chr2:64070600-64072600 Enhancers Primary T cells from cord blood blood
49 chr2:64070600-64073000 Enhancers Brain Anterior Caudate brain
50 chr2:64070600-64073000 Active TSS GM12878-XiMat blood

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